RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
CTNNA1-210ENST00000518825 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
CTNNA1-210ENST00000518825 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
CTNNA1-210ENST00000518825 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CTNNA1-210ENST00000518825 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
CTNNA1-210ENST00000518825 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
CTNNA1-210ENST00000518825 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-210ENST00000518825 MT1GP13640 62 aa2.75□□□□□ -1.97
CTNNA1-210ENST00000518825 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CTNNA1-210ENST00000518825 MT1MQ8N339 61 aa2.73□□□□□ -1.97
CTNNA1-210ENST00000518825 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
CTNNA1-210ENST00000518825 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
CTNNA1-210ENST00000518825 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
CTNNA1-210ENST00000518825 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
CTNNA1-210ENST00000518825 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
CTNNA1-210ENST00000518825 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CTNNA1-210ENST00000518825 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
CTNNA1-210ENST00000518825 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
CTNNA1-210ENST00000518825 KRTAP12-4P60329 112 aa2.54□□□□□ -2
CTNNA1-210ENST00000518825 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
CTNNA1-210ENST00000518825 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
CTNNA1-210ENST00000518825 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
CTNNA1-210ENST00000518825 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
CTNNA1-210ENST00000518825 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
CTNNA1-210ENST00000518825 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
CTNNA1-210ENST00000518825 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
CTNNA1-210ENST00000518825 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
CTNNA1-210ENST00000518825 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-210ENST00000518825 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
CTNNA1-210ENST00000518825 MT1AP04731 61 aa2.43□□□□□ -2.02
CTNNA1-210ENST00000518825 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CTNNA1-210ENST00000518825 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CTNNA1-210ENST00000518825 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CTNNA1-210ENST00000518825 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CTNNA1-210ENST00000518825 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-210ENST00000518825 MT3P25713 68 aa2.33□□□□□ -2.04
CTNNA1-210ENST00000518825 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
CTNNA1-210ENST00000518825 PRM1P04553 51 aa2.27□□□□□ -2.05
CTNNA1-210ENST00000518825 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
CTNNA1-210ENST00000518825 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
CTNNA1-210ENST00000518825 SPRR2DP22532 72 aa2.24□□□□□ -2.05
CTNNA1-210ENST00000518825 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
CTNNA1-210ENST00000518825 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CTNNA1-210ENST00000518825 KRTAP4-6Q9BYQ5 205 aa2.18□□□□□ -2.06
CTNNA1-210ENST00000518825 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
CTNNA1-210ENST00000518825 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
CTNNA1-210ENST00000518825 NEBP20929 6669 aa2.1□□□□□ -2.07
CTNNA1-210ENST00000518825 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
CTNNA1-210ENST00000518825 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
CTNNA1-210ENST00000518825 MT4P47944 62 aa2.01□□□□□ -2.09
CTNNA1-210ENST00000518825 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
CTNNA1-210ENST00000518825 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CTNNA1-210ENST00000518825 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
CTNNA1-210ENST00000518825 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
CTNNA1-210ENST00000518825 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
CTNNA1-210ENST00000518825 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
CTNNA1-210ENST00000518825 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
CTNNA1-210ENST00000518825 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
CTNNA1-210ENST00000518825 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
CTNNA1-210ENST00000518825 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CTNNA1-210ENST00000518825 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CTNNA1-210ENST00000518825 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
CTNNA1-210ENST00000518825 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
CTNNA1-210ENST00000518825 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
CTNNA1-210ENST00000518825 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
CTNNA1-210ENST00000518825 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
CTNNA1-210ENST00000518825 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
CTNNA1-210ENST00000518825 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
CTNNA1-210ENST00000518825 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
CTNNA1-210ENST00000518825 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CTNNA1-210ENST00000518825 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CTNNA1-210ENST00000518825 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 68.5 ms