RNA–Protein interactions for RNA: ENST00000517500.5

SORBS3-202, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-202ENST00000517500 Q1T7F1 81 aa7.51□□□□□ -1.21
SORBS3-202ENST00000517500 MT1MQ8N339 61 aa7.51□□□□□ -1.21
SORBS3-202ENST00000517500 K7ERS5 55 aa7.4□□□□□ -1.22
SORBS3-202ENST00000517500 PSPHP1O15172 72 aa7.4□□□□□ -1.22
SORBS3-202ENST00000517500 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
SORBS3-202ENST00000517500 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
SORBS3-202ENST00000517500 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SORBS3-202ENST00000517500 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
SORBS3-202ENST00000517500 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
SORBS3-202ENST00000517500 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
SORBS3-202ENST00000517500 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
SORBS3-202ENST00000517500 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
SORBS3-202ENST00000517500 KRTAP5-4Q6L8H1 288 aa7.18□□□□□ -1.26
SORBS3-202ENST00000517500 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
SORBS3-202ENST00000517500 A6NED7 52 aa7.16□□□□□ -1.26
SORBS3-202ENST00000517500 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
SORBS3-202ENST00000517500 MT4P47944 62 aa7.06□□□□□ -1.28
SORBS3-202ENST00000517500 PCP4P48539 62 aa7.06□□□□□ -1.28
SORBS3-202ENST00000517500 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
SORBS3-202ENST00000517500 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
SORBS3-202ENST00000517500 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
SORBS3-202ENST00000517500 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
SORBS3-202ENST00000517500 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
SORBS3-202ENST00000517500 ROMO1P60602 79 aa6.91□□□□□ -1.3
SORBS3-202ENST00000517500 GPR98Q8WXG9 6306 aa6.87□□□□□ -1.31
SORBS3-202ENST00000517500 LCE3CQ5T5A8 94 aa6.84□□□□□ -1.31
SORBS3-202ENST00000517500 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
SORBS3-202ENST00000517500 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
SORBS3-202ENST00000517500 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
SORBS3-202ENST00000517500 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
SORBS3-202ENST00000517500 KRTAP20-2Q3LI61 65 aa6.71□□□□□ -1.34
SORBS3-202ENST00000517500 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.34
SORBS3-202ENST00000517500 AHNAK2Q8IVF2 5795 aa6.57□□□□□ -1.36
SORBS3-202ENST00000517500 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
SORBS3-202ENST00000517500 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.37
SORBS3-202ENST00000517500 MT1AP04731 61 aa6.45□□□□□ -1.38
SORBS3-202ENST00000517500 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
SORBS3-202ENST00000517500 KRTAP5-7Q6L8G8 165 aa6.41□□□□□ -1.38
SORBS3-202ENST00000517500 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
SORBS3-202ENST00000517500 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
SORBS3-202ENST00000517500 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
SORBS3-202ENST00000517500 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
SORBS3-202ENST00000517500 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
SORBS3-202ENST00000517500 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
SORBS3-202ENST00000517500 MT3P25713 68 aa5.93□□□□□ -1.46
SORBS3-202ENST00000517500 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
SORBS3-202ENST00000517500 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
SORBS3-202ENST00000517500 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
SORBS3-202ENST00000517500 KRTAP5-1Q6L8H4 278 aa5.63□□□□□ -1.51
SORBS3-202ENST00000517500 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
SORBS3-202ENST00000517500 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
SORBS3-202ENST00000517500 LCE1EQ5T753 118 aa5.49□□□□□ -1.53
SORBS3-202ENST00000517500 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
SORBS3-202ENST00000517500 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
SORBS3-202ENST00000517500 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
SORBS3-202ENST00000517500 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
SORBS3-202ENST00000517500 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
SORBS3-202ENST00000517500 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
SORBS3-202ENST00000517500 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
SORBS3-202ENST00000517500 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
SORBS3-202ENST00000517500 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SORBS3-202ENST00000517500 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
SORBS3-202ENST00000517500 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
SORBS3-202ENST00000517500 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
SORBS3-202ENST00000517500 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
SORBS3-202ENST00000517500 H3BS24 57 aa4.58□□□□□ -1.68
SORBS3-202ENST00000517500 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
SORBS3-202ENST00000517500 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
SORBS3-202ENST00000517500 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SORBS3-202ENST00000517500 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
SORBS3-202ENST00000517500 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
SORBS3-202ENST00000517500 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
SORBS3-202ENST00000517500 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SORBS3-202ENST00000517500 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
SORBS3-202ENST00000517500 PRM1P04553 51 aa3.49□□□□□ -1.85
SORBS3-202ENST00000517500 INE1O15225 51 aa3.13□□□□□ -1.91
SORBS3-202ENST00000517500 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SORBS3-202ENST00000517500 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms