RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
PDGFRB-202ENST00000517488 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
PDGFRB-202ENST00000517488 PSPHP1O15172 72 aa4.91□□□□□ -1.62
PDGFRB-202ENST00000517488 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
PDGFRB-202ENST00000517488 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
PDGFRB-202ENST00000517488 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
PDGFRB-202ENST00000517488 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
PDGFRB-202ENST00000517488 V9GYY9 64 aa4.88□□□□□ -1.63
PDGFRB-202ENST00000517488 Q1T7F1 81 aa4.87□□□□□ -1.63
PDGFRB-202ENST00000517488 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
PDGFRB-202ENST00000517488 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
PDGFRB-202ENST00000517488 K7ERS5 55 aa4.82□□□□□ -1.64
PDGFRB-202ENST00000517488 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
PDGFRB-202ENST00000517488 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
PDGFRB-202ENST00000517488 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
PDGFRB-202ENST00000517488 MT4P47944 62 aa4.75□□□□□ -1.65
PDGFRB-202ENST00000517488 A6NED7 52 aa4.72□□□□□ -1.65
PDGFRB-202ENST00000517488 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
PDGFRB-202ENST00000517488 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
PDGFRB-202ENST00000517488 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
PDGFRB-202ENST00000517488 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
PDGFRB-202ENST00000517488 PCP4P48539 62 aa4.61□□□□□ -1.67
PDGFRB-202ENST00000517488 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
PDGFRB-202ENST00000517488 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
PDGFRB-202ENST00000517488 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
PDGFRB-202ENST00000517488 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
PDGFRB-202ENST00000517488 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
PDGFRB-202ENST00000517488 ROMO1P60602 79 aa4.54□□□□□ -1.68
PDGFRB-202ENST00000517488 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
PDGFRB-202ENST00000517488 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
PDGFRB-202ENST00000517488 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
PDGFRB-202ENST00000517488 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
PDGFRB-202ENST00000517488 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
PDGFRB-202ENST00000517488 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
PDGFRB-202ENST00000517488 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
PDGFRB-202ENST00000517488 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
PDGFRB-202ENST00000517488 MT1AP04731 61 aa4.26□□□□□ -1.73
PDGFRB-202ENST00000517488 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
PDGFRB-202ENST00000517488 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
PDGFRB-202ENST00000517488 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
PDGFRB-202ENST00000517488 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
PDGFRB-202ENST00000517488 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
PDGFRB-202ENST00000517488 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
PDGFRB-202ENST00000517488 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
PDGFRB-202ENST00000517488 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
PDGFRB-202ENST00000517488 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
PDGFRB-202ENST00000517488 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
PDGFRB-202ENST00000517488 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
PDGFRB-202ENST00000517488 MT3P25713 68 aa3.9□□□□□ -1.79
PDGFRB-202ENST00000517488 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
PDGFRB-202ENST00000517488 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
PDGFRB-202ENST00000517488 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
PDGFRB-202ENST00000517488 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
PDGFRB-202ENST00000517488 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
PDGFRB-202ENST00000517488 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
PDGFRB-202ENST00000517488 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
PDGFRB-202ENST00000517488 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
PDGFRB-202ENST00000517488 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
PDGFRB-202ENST00000517488 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PDGFRB-202ENST00000517488 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
PDGFRB-202ENST00000517488 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
PDGFRB-202ENST00000517488 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
PDGFRB-202ENST00000517488 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PDGFRB-202ENST00000517488 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PDGFRB-202ENST00000517488 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
PDGFRB-202ENST00000517488 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PDGFRB-202ENST00000517488 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
PDGFRB-202ENST00000517488 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
PDGFRB-202ENST00000517488 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
PDGFRB-202ENST00000517488 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
PDGFRB-202ENST00000517488 H3BS24 57 aa2.54□□□□□ -2
PDGFRB-202ENST00000517488 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
PDGFRB-202ENST00000517488 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
PDGFRB-202ENST00000517488 PRM1P04553 51 aa2.33□□□□□ -2.04
PDGFRB-202ENST00000517488 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
PDGFRB-202ENST00000517488 INE1O15225 51 aa2.05□□□□□ -2.08
PDGFRB-202ENST00000517488 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
PDGFRB-202ENST00000517488 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 44.6 ms