RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
SCARNA18.1-201ENST00000516330 KRTAP25-1Q3LHN0 102 aa2.11□□□□□ -2.07
SCARNA18.1-201ENST00000516330 Q1T7F1 81 aa2.1□□□□□ -2.07
SCARNA18.1-201ENST00000516330 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
SCARNA18.1-201ENST00000516330 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
SCARNA18.1-201ENST00000516330 KRTAP19-4Q3LI73 84 aa2.08□□□□□ -2.08
SCARNA18.1-201ENST00000516330 KRTAP23-1A1A580 65 aa2.07□□□□□ -2.08
SCARNA18.1-201ENST00000516330 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
SCARNA18.1-201ENST00000516330 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
SCARNA18.1-201ENST00000516330 PSPHP1O15172 72 aa2.04□□□□□ -2.08
SCARNA18.1-201ENST00000516330 KRTAP4-9Q9BYQ8 210 aa2.03□□□□□ -2.08
SCARNA18.1-201ENST00000516330 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SCARNA18.1-201ENST00000516330 A6NED7 52 aa2.01□□□□□ -2.09
SCARNA18.1-201ENST00000516330 CDC42SE1Q9NRR8 79 aa2□□□□□ -2.09
SCARNA18.1-201ENST00000516330 MT4P47944 62 aa1.99□□□□□ -2.09
SCARNA18.1-201ENST00000516330 RPS28P62857 69 aaKnown RBP1.99□□□□□ -2.09
SCARNA18.1-201ENST00000516330 KRTAP4-3Q9BYR4 195 aa1.99□□□□□ -2.09
SCARNA18.1-201ENST00000516330 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
SCARNA18.1-201ENST00000516330 KRTAP15-1Q3LI76 137 aa1.96□□□□□ -2.1
SCARNA18.1-201ENST00000516330 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
SCARNA18.1-201ENST00000516330 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
SCARNA18.1-201ENST00000516330 ROMO1P60602 79 aa1.94□□□□□ -2.1
SCARNA18.1-201ENST00000516330 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SCARNA18.1-201ENST00000516330 KRTAP4-6Q9BYQ5 205 aa1.93□□□□□ -2.1
SCARNA18.1-201ENST00000516330 PCP4P48539 62 aa1.92□□□□□ -2.1
SCARNA18.1-201ENST00000516330 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
SCARNA18.1-201ENST00000516330 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
SCARNA18.1-201ENST00000516330 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
SCARNA18.1-201ENST00000516330 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
SCARNA18.1-201ENST00000516330 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
SCARNA18.1-201ENST00000516330 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
SCARNA18.1-201ENST00000516330 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
SCARNA18.1-201ENST00000516330 LOC100996750A0A140TA64 210 aa1.85□□□□□ -2.11
SCARNA18.1-201ENST00000516330 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
SCARNA18.1-201ENST00000516330 MT1AP04731 61 aa1.84□□□□□ -2.11
SCARNA18.1-201ENST00000516330 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
SCARNA18.1-201ENST00000516330 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
SCARNA18.1-201ENST00000516330 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
SCARNA18.1-201ENST00000516330 KRTAP9-4Q9BYQ2 154 aa1.74□□□□□ -2.13
SCARNA18.1-201ENST00000516330 KRTAP4-11Q9BYQ6 195 aa1.74□□□□□ -2.13
SCARNA18.1-201ENST00000516330 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
SCARNA18.1-201ENST00000516330 OBSCNQ5VST9 7968 aa1.71□□□□□ -2.14
SCARNA18.1-201ENST00000516330 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
SCARNA18.1-201ENST00000516330 MT3P25713 68 aa1.69□□□□□ -2.14
SCARNA18.1-201ENST00000516330 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
SCARNA18.1-201ENST00000516330 PMAIP1Q13794 54 aa1.62□□□□□ -2.15
SCARNA18.1-201ENST00000516330 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
SCARNA18.1-201ENST00000516330 KRTAP9-9Q9BYP9 154 aa1.6□□□□□ -2.15
SCARNA18.1-201ENST00000516330 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
SCARNA18.1-201ENST00000516330 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
SCARNA18.1-201ENST00000516330 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
SCARNA18.1-201ENST00000516330 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
SCARNA18.1-201ENST00000516330 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.17
SCARNA18.1-201ENST00000516330 PRAC1Q96KF2 57 aa1.5□□□□□ -2.17
SCARNA18.1-201ENST00000516330 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
SCARNA18.1-201ENST00000516330 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
SCARNA18.1-201ENST00000516330 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
SCARNA18.1-201ENST00000516330 KRTAP4-2Q9BYR5 136 aa1.45□□□□□ -2.18
SCARNA18.1-201ENST00000516330 SVIPQ8NHG7 77 aa1.39□□□□□ -2.19
SCARNA18.1-201ENST00000516330 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
SCARNA18.1-201ENST00000516330 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
SCARNA18.1-201ENST00000516330 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
SCARNA18.1-201ENST00000516330 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SCARNA18.1-201ENST00000516330 LCE3EQ5T5B0 92 aa1.31□□□□□ -2.2
SCARNA18.1-201ENST00000516330 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
SCARNA18.1-201ENST00000516330 KRTAP4-12Q9BQ66 201 aa1.21□□□□□ -2.22
SCARNA18.1-201ENST00000516330 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
SCARNA18.1-201ENST00000516330 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
SCARNA18.1-201ENST00000516330 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.25
SCARNA18.1-201ENST00000516330 NDUFAF8A1L188 74 aa1.02□□□□□ -2.25
SCARNA18.1-201ENST00000516330 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
SCARNA18.1-201ENST00000516330 PRM1P04553 51 aa0.97□□□□□ -2.25
SCARNA18.1-201ENST00000516330 INE1O15225 51 aa0.89□□□□□ -2.27
SCARNA18.1-201ENST00000516330 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SCARNA18.1-201ENST00000516330 A0A0A0MQY5 61 aa0.86□□□□□ -2.27
SCARNA18.1-201ENST00000516330 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
SCARNA18.1-201ENST00000516330 H3BS24 57 aa0.27□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms