RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 S100A6P06703 90 aa0.24□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 TNP1P09430 55 aa0.24□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 SPINT4Q6UDR6 99 aa0.24□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 ATOX1O00244 68 aa0.23□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 KRTAP25-1Q3LHN0 102 aa0.23□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 UBL5Q9BZL1 73 aa0.23□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 TSTD3H0UI37 97 aa0.22□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 KRTAP19-4Q3LI73 84 aa0.22□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 ETDBQ3ZM63 59 aa0.22□□□□□ -2.37
RNU4ATAC11P-201ENST00000515939 A0A1B0GU33 70 aa0.21□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 ACYP2P14621 99 aa0.21□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 M0R143 59 aa0.2□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 S100A1P23297 94 aa0.2□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 HIST1H4AP62805 103 aaKnown RBP0.2□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 KRTAP21-1Q3LI58 79 aa0.2□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 H3BPC8 53 aa0.19□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 MP68P56378 58 aa0.19□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 COA5Q86WW8 74 aa0.19□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 SNURFQ9Y675 71 aa0.19□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 LOC105371267A0A1B0GV96 52 aa0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 FAM240AA0A1B0GVK7 77 aa0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 KRTAP23-1A1A580 65 aa0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 LINC00643Q86TS7 51 aa0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 SPANXA2-OT1Q8N9U9 137 aa0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 TMA7Q9Y2S6 64 aaKnown RBP0.18□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 F8W1H4 67 aa0.17□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 CHKB-CPT1BH3BT56 60 aa0.17□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 ATP5EP2Q5VTU8 51 aa0.17□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 SPTSSBQ8NFR3 76 aa0.17□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 SMIM26A0A096LP01 95 aa0.16□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 SMIM6P0DI80 62 aa0.16□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 LCE3DQ9BYE3 92 aa0.16□□□□□ -2.38
RNU4ATAC11P-201ENST00000515939 COL5A1-AS1Q5SY13 56 aa0.15□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 SERP1Q9Y6X1 66 aa0.15□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 MUC16Q8WXI7 14507 aa0.15□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 H7BZZ5 65 aa0.14□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 A0A1B0GU69 56 aa0.13□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 SCGB1A1P11684 91 aa0.13□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 LCE3EQ5T5B0 92 aa0.13□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 GTF2H5Q6ZYL4 71 aa0.13□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 A0A1B0GV90 55 aa0.12□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 SEC61GP60059 68 aa0.12□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 SERP2Q8N6R1 65 aa0.12□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 LINC01558Q9Y6Z2 57 aa0.12□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 PCP4L1A6NKN8 68 aa0.1□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 Q1T7F1 81 aa0.1□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 SMIM20Q8N5G0 67 aa0.1□□□□□ -2.39
RNU4ATAC11P-201ENST00000515939 UQCR11O14957 56 aa0.09□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 COX7CP15954 63 aa0.09□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 RPS28P62857 69 aaKnown RBP0.09□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 MIR22HGQ0VDD5 57 aa0.09□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 PRR15LQ9BU68 103 aa0.09□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 ROMO1P60602 79 aa0.08□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 CCDC179H3BU77 68 aa0.07□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 PSPHP1O15172 72 aa0.06□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 PRM1P04553 51 aa0.06□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 CDC42SE1Q9NRR8 79 aa0.05□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 J3QR89 54 aa0.04□□□□□ -2.4
RNU4ATAC11P-201ENST00000515939 K7ERS5 55 aa0.02□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 K7ERU9 68 aa0.02□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 A6NED7 52 aa0□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 ATP5EP56381 51 aaPredicted RBP0□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 ANAPC13Q9BS18 74 aa0□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 TMEM258P61165 79 aa-0.01□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 PRAC1Q96KF2 57 aa-0.02□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 V9GYY9 64 aa-0.03□□□□□ -2.41
RNU4ATAC11P-201ENST00000515939 PMAIP1Q13794 54 aa-0.12□□□□□ -2.43
RNU4ATAC11P-201ENST00000515939 BRK1Q8WUW1 75 aa-0.12□□□□□ -2.43
RNU4ATAC11P-201ENST00000515939 LUZP6Q538Z0 58 aa-0.13□□□□□ -2.43
RNU4ATAC11P-201ENST00000515939 NDUFAF8A1L188 74 aa-0.16□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 PCP4P48539 62 aa-0.18□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 KTN1-AS1Q86SY8 53 aa-0.18□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 INE1O15225 51 aa-0.2□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 SVIPQ8NHG7 77 aa-0.2□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 PRO0628Q9UI54 55 aa-0.22□□□□□ -2.44
RNU4ATAC11P-201ENST00000515939 A0A0A0MQY5 61 aa-0.29□□□□□ -2.46
RNU4ATAC11P-201ENST00000515939 H3BS24 57 aa-0.48□□□□□ -2.49
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms