RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 MT1GP13640 62 aa5.2□□□□□ -1.58
SDHA-218ENST00000515752 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
SDHA-218ENST00000515752 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SDHA-218ENST00000515752 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SDHA-218ENST00000515752 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
SDHA-218ENST00000515752 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
SDHA-218ENST00000515752 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
SDHA-218ENST00000515752 MT1MQ8N339 61 aa5.11□□□□□ -1.59
SDHA-218ENST00000515752 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
SDHA-218ENST00000515752 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
SDHA-218ENST00000515752 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
SDHA-218ENST00000515752 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SDHA-218ENST00000515752 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SDHA-218ENST00000515752 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
SDHA-218ENST00000515752 INE1O15225 51 aa4.93□□□□□ -1.62
SDHA-218ENST00000515752 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
SDHA-218ENST00000515752 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
SDHA-218ENST00000515752 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
SDHA-218ENST00000515752 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
SDHA-218ENST00000515752 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.64
SDHA-218ENST00000515752 SPRR2EP22531 72 aa4.8□□□□□ -1.64
SDHA-218ENST00000515752 SPRR2BP35325 72 aa4.8□□□□□ -1.64
SDHA-218ENST00000515752 SPRR2AP35326 72 aa4.8□□□□□ -1.64
SDHA-218ENST00000515752 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
SDHA-218ENST00000515752 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
SDHA-218ENST00000515752 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
SDHA-218ENST00000515752 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SDHA-218ENST00000515752 MT1AP04731 61 aa4.59□□□□□ -1.67
SDHA-218ENST00000515752 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SDHA-218ENST00000515752 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
SDHA-218ENST00000515752 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
SDHA-218ENST00000515752 MT3P25713 68 aa4.37□□□□□ -1.71
SDHA-218ENST00000515752 NEBP20929 6669 aa4.33□□□□□ -1.72
SDHA-218ENST00000515752 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
SDHA-218ENST00000515752 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
SDHA-218ENST00000515752 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
SDHA-218ENST00000515752 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
SDHA-218ENST00000515752 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SDHA-218ENST00000515752 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
SDHA-218ENST00000515752 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
SDHA-218ENST00000515752 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
SDHA-218ENST00000515752 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
SDHA-218ENST00000515752 LCE1FQ5T754 118 aa4.09□□□□□ -1.76
SDHA-218ENST00000515752 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
SDHA-218ENST00000515752 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SDHA-218ENST00000515752 MT4P47944 62 aa3.98□□□□□ -1.77
SDHA-218ENST00000515752 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
SDHA-218ENST00000515752 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
SDHA-218ENST00000515752 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
SDHA-218ENST00000515752 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SDHA-218ENST00000515752 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
SDHA-218ENST00000515752 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
SDHA-218ENST00000515752 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
SDHA-218ENST00000515752 PRM1P04553 51 aa3.7□□□□□ -1.82
SDHA-218ENST00000515752 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SDHA-218ENST00000515752 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
SDHA-218ENST00000515752 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
SDHA-218ENST00000515752 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SDHA-218ENST00000515752 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SDHA-218ENST00000515752 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
SDHA-218ENST00000515752 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SDHA-218ENST00000515752 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
SDHA-218ENST00000515752 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
SDHA-218ENST00000515752 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SDHA-218ENST00000515752 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SDHA-218ENST00000515752 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
SDHA-218ENST00000515752 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
SDHA-218ENST00000515752 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
SDHA-218ENST00000515752 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SDHA-218ENST00000515752 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SDHA-218ENST00000515752 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
SDHA-218ENST00000515752 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SDHA-218ENST00000515752 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms