RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 PSPHP1O15172 72 aa7.06□□□□□ -1.28
ABCC3-217ENST00000515707 Q1T7F1 81 aa7.05□□□□□ -1.28
ABCC3-217ENST00000515707 K7ERS5 55 aa7.02□□□□□ -1.29
ABCC3-217ENST00000515707 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
ABCC3-217ENST00000515707 GPR98Q8WXG9 6306 aa7.02□□□□□ -1.29
ABCC3-217ENST00000515707 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
ABCC3-217ENST00000515707 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
ABCC3-217ENST00000515707 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
ABCC3-217ENST00000515707 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
ABCC3-217ENST00000515707 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
ABCC3-217ENST00000515707 A6NED7 52 aa6.83□□□□□ -1.32
ABCC3-217ENST00000515707 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
ABCC3-217ENST00000515707 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
ABCC3-217ENST00000515707 MT4P47944 62 aa6.79□□□□□ -1.32
ABCC3-217ENST00000515707 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
ABCC3-217ENST00000515707 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
ABCC3-217ENST00000515707 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
ABCC3-217ENST00000515707 PCP4P48539 62 aa6.67□□□□□ -1.34
ABCC3-217ENST00000515707 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
ABCC3-217ENST00000515707 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
ABCC3-217ENST00000515707 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
ABCC3-217ENST00000515707 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
ABCC3-217ENST00000515707 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
ABCC3-217ENST00000515707 ROMO1P60602 79 aa6.55□□□□□ -1.36
ABCC3-217ENST00000515707 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
ABCC3-217ENST00000515707 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
ABCC3-217ENST00000515707 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
ABCC3-217ENST00000515707 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.38
ABCC3-217ENST00000515707 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
ABCC3-217ENST00000515707 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
ABCC3-217ENST00000515707 KRTAP5-10Q6L8G5 202 aa6.34□□□□□ -1.39
ABCC3-217ENST00000515707 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
ABCC3-217ENST00000515707 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
ABCC3-217ENST00000515707 MT1AP04731 61 aa6.14□□□□□ -1.43
ABCC3-217ENST00000515707 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
ABCC3-217ENST00000515707 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
ABCC3-217ENST00000515707 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
ABCC3-217ENST00000515707 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
ABCC3-217ENST00000515707 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
ABCC3-217ENST00000515707 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
ABCC3-217ENST00000515707 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
ABCC3-217ENST00000515707 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
ABCC3-217ENST00000515707 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
ABCC3-217ENST00000515707 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
ABCC3-217ENST00000515707 MT3P25713 68 aa5.59□□□□□ -1.51
ABCC3-217ENST00000515707 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
ABCC3-217ENST00000515707 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
ABCC3-217ENST00000515707 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
ABCC3-217ENST00000515707 MUC5BQ9HC84 5762 aaPredicted RBP5.37□□□□□ -1.55
ABCC3-217ENST00000515707 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
ABCC3-217ENST00000515707 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
ABCC3-217ENST00000515707 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
ABCC3-217ENST00000515707 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
ABCC3-217ENST00000515707 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
ABCC3-217ENST00000515707 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
ABCC3-217ENST00000515707 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
ABCC3-217ENST00000515707 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
ABCC3-217ENST00000515707 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
ABCC3-217ENST00000515707 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
ABCC3-217ENST00000515707 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
ABCC3-217ENST00000515707 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
ABCC3-217ENST00000515707 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
ABCC3-217ENST00000515707 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
ABCC3-217ENST00000515707 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
ABCC3-217ENST00000515707 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
ABCC3-217ENST00000515707 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
ABCC3-217ENST00000515707 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
ABCC3-217ENST00000515707 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
ABCC3-217ENST00000515707 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
ABCC3-217ENST00000515707 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
ABCC3-217ENST00000515707 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
ABCC3-217ENST00000515707 PRM1P04553 51 aa3.35□□□□□ -1.87
ABCC3-217ENST00000515707 INE1O15225 51 aa2.9□□□□□ -1.95
ABCC3-217ENST00000515707 H3BS24 57 aa2.85□□□□□ -1.95
ABCC3-217ENST00000515707 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
ABCC3-217ENST00000515707 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
ABCC3-217ENST00000515707 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 268 ms