RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 SPRR2AP35326 72 aa4.55□□□□□ -1.68
SH3TC1-225ENST00000515682 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
SH3TC1-225ENST00000515682 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
SH3TC1-225ENST00000515682 MT1GP13640 62 aa4.54□□□□□ -1.68
SH3TC1-225ENST00000515682 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
SH3TC1-225ENST00000515682 MT1LQ93083 61 aa4.51□□□□□ -1.69
SH3TC1-225ENST00000515682 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
SH3TC1-225ENST00000515682 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
SH3TC1-225ENST00000515682 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
SH3TC1-225ENST00000515682 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
SH3TC1-225ENST00000515682 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
SH3TC1-225ENST00000515682 MT1EP04732 61 aa4.45□□□□□ -1.7
SH3TC1-225ENST00000515682 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
SH3TC1-225ENST00000515682 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
SH3TC1-225ENST00000515682 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
SH3TC1-225ENST00000515682 SPRR2DP22532 72 aa4.38□□□□□ -1.71
SH3TC1-225ENST00000515682 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
SH3TC1-225ENST00000515682 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
SH3TC1-225ENST00000515682 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
SH3TC1-225ENST00000515682 MT1MQ8N339 61 aa4.25□□□□□ -1.73
SH3TC1-225ENST00000515682 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
SH3TC1-225ENST00000515682 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
SH3TC1-225ENST00000515682 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
SH3TC1-225ENST00000515682 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
SH3TC1-225ENST00000515682 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
SH3TC1-225ENST00000515682 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SH3TC1-225ENST00000515682 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
SH3TC1-225ENST00000515682 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
SH3TC1-225ENST00000515682 PRM1P04553 51 aa4.04□□□□□ -1.76
SH3TC1-225ENST00000515682 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
SH3TC1-225ENST00000515682 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
SH3TC1-225ENST00000515682 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
SH3TC1-225ENST00000515682 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
SH3TC1-225ENST00000515682 MT4P47944 62 aa3.92□□□□□ -1.78
SH3TC1-225ENST00000515682 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
SH3TC1-225ENST00000515682 MT1AP04731 61 aa3.83□□□□□ -1.8
SH3TC1-225ENST00000515682 MT3P25713 68 aa3.8□□□□□ -1.8
SH3TC1-225ENST00000515682 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
SH3TC1-225ENST00000515682 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
SH3TC1-225ENST00000515682 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
SH3TC1-225ENST00000515682 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
SH3TC1-225ENST00000515682 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
SH3TC1-225ENST00000515682 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
SH3TC1-225ENST00000515682 NEBP20929 6669 aa3.55□□□□□ -1.84
SH3TC1-225ENST00000515682 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SH3TC1-225ENST00000515682 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
SH3TC1-225ENST00000515682 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
SH3TC1-225ENST00000515682 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.85
SH3TC1-225ENST00000515682 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
SH3TC1-225ENST00000515682 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
SH3TC1-225ENST00000515682 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SH3TC1-225ENST00000515682 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
SH3TC1-225ENST00000515682 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
SH3TC1-225ENST00000515682 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SH3TC1-225ENST00000515682 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
SH3TC1-225ENST00000515682 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
SH3TC1-225ENST00000515682 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
SH3TC1-225ENST00000515682 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
SH3TC1-225ENST00000515682 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SH3TC1-225ENST00000515682 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SH3TC1-225ENST00000515682 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
SH3TC1-225ENST00000515682 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
SH3TC1-225ENST00000515682 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
SH3TC1-225ENST00000515682 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SH3TC1-225ENST00000515682 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
SH3TC1-225ENST00000515682 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
SH3TC1-225ENST00000515682 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
SH3TC1-225ENST00000515682 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SH3TC1-225ENST00000515682 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SH3TC1-225ENST00000515682 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
SH3TC1-225ENST00000515682 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SH3TC1-225ENST00000515682 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
SH3TC1-225ENST00000515682 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
SH3TC1-225ENST00000515682 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
SH3TC1-225ENST00000515682 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
SH3TC1-225ENST00000515682 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
SH3TC1-225ENST00000515682 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SH3TC1-225ENST00000515682 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms