RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
PCDH1-208ENST00000515351 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
PCDH1-208ENST00000515351 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
PCDH1-208ENST00000515351 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
PCDH1-208ENST00000515351 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
PCDH1-208ENST00000515351 MT1GP13640 62 aa4.89□□□□□ -1.63
PCDH1-208ENST00000515351 MT1MQ8N339 61 aa4.89□□□□□ -1.63
PCDH1-208ENST00000515351 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
PCDH1-208ENST00000515351 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
PCDH1-208ENST00000515351 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
PCDH1-208ENST00000515351 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
PCDH1-208ENST00000515351 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
PCDH1-208ENST00000515351 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
PCDH1-208ENST00000515351 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
PCDH1-208ENST00000515351 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
PCDH1-208ENST00000515351 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
PCDH1-208ENST00000515351 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.69
PCDH1-208ENST00000515351 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
PCDH1-208ENST00000515351 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
PCDH1-208ENST00000515351 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
PCDH1-208ENST00000515351 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
PCDH1-208ENST00000515351 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
PCDH1-208ENST00000515351 MT1AP04731 61 aa4.39□□□□□ -1.71
PCDH1-208ENST00000515351 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
PCDH1-208ENST00000515351 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
PCDH1-208ENST00000515351 SPRR2EP22531 72 aa4.34□□□□□ -1.72
PCDH1-208ENST00000515351 SPRR2BP35325 72 aa4.34□□□□□ -1.72
PCDH1-208ENST00000515351 SPRR2AP35326 72 aa4.34□□□□□ -1.72
PCDH1-208ENST00000515351 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
PCDH1-208ENST00000515351 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
PCDH1-208ENST00000515351 SPRR2DP22532 72 aa4.16□□□□□ -1.74
PCDH1-208ENST00000515351 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
PCDH1-208ENST00000515351 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
PCDH1-208ENST00000515351 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
PCDH1-208ENST00000515351 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
PCDH1-208ENST00000515351 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
PCDH1-208ENST00000515351 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
PCDH1-208ENST00000515351 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
PCDH1-208ENST00000515351 MT3P25713 68 aa3.95□□□□□ -1.78
PCDH1-208ENST00000515351 PRM1P04553 51 aa3.92□□□□□ -1.78
PCDH1-208ENST00000515351 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
PCDH1-208ENST00000515351 NEBP20929 6669 aa3.75□□□□□ -1.81
PCDH1-208ENST00000515351 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
PCDH1-208ENST00000515351 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
PCDH1-208ENST00000515351 MT4P47944 62 aa3.64□□□□□ -1.83
PCDH1-208ENST00000515351 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
PCDH1-208ENST00000515351 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
PCDH1-208ENST00000515351 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
PCDH1-208ENST00000515351 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
PCDH1-208ENST00000515351 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
PCDH1-208ENST00000515351 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
PCDH1-208ENST00000515351 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
PCDH1-208ENST00000515351 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
PCDH1-208ENST00000515351 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
PCDH1-208ENST00000515351 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
PCDH1-208ENST00000515351 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
PCDH1-208ENST00000515351 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
PCDH1-208ENST00000515351 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
PCDH1-208ENST00000515351 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PCDH1-208ENST00000515351 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
PCDH1-208ENST00000515351 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
PCDH1-208ENST00000515351 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PCDH1-208ENST00000515351 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PCDH1-208ENST00000515351 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
PCDH1-208ENST00000515351 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
PCDH1-208ENST00000515351 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PCDH1-208ENST00000515351 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
PCDH1-208ENST00000515351 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.98
PCDH1-208ENST00000515351 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
PCDH1-208ENST00000515351 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
PCDH1-208ENST00000515351 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PCDH1-208ENST00000515351 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PCDH1-208ENST00000515351 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
PCDH1-208ENST00000515351 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
PCDH1-208ENST00000515351 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
PCDH1-208ENST00000515351 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
PCDH1-208ENST00000515351 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
PCDH1-208ENST00000515351 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 84.3 ms