RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 LPAP08519 4548 aa0.98□□□□□ -2.25
SEC24D-213ENST00000514418 INE1O15225 51 aa0.98□□□□□ -2.25
SEC24D-213ENST00000514418 FLGP20930 4061 aaPredicted RBP0.97□□□□□ -2.25
SEC24D-213ENST00000514418 DNHD1Q96M86 4753 aa0.94□□□□□ -2.26
SEC24D-213ENST00000514418 SMR3BP02814 79 aaPredicted RBP0.94□□□□□ -2.26
SEC24D-213ENST00000514418 KRTAP19-2Q3LHN2 52 aa0.94□□□□□ -2.26
SEC24D-213ENST00000514418 LRP2P98164 4655 aa0.94□□□□□ -2.26
SEC24D-213ENST00000514418 HERC1Q15751 4861 aa0.93□□□□□ -2.26
SEC24D-213ENST00000514418 Q5VSD8 79 aa0.93□□□□□ -2.26
SEC24D-213ENST00000514418 TNP1P09430 55 aa0.92□□□□□ -2.26
SEC24D-213ENST00000514418 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
SEC24D-213ENST00000514418 KMT2CQ8NEZ4 4911 aaKnown RBP0.9□□□□□ -2.27
SEC24D-213ENST00000514418 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
SEC24D-213ENST00000514418 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
SEC24D-213ENST00000514418 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
SEC24D-213ENST00000514418 RYR2Q92736 4967 aa0.86□□□□□ -2.27
SEC24D-213ENST00000514418 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
SEC24D-213ENST00000514418 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
SEC24D-213ENST00000514418 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
SEC24D-213ENST00000514418 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
SEC24D-213ENST00000514418 RYR1P21817 5038 aa0.83□□□□□ -2.28
SEC24D-213ENST00000514418 HMCN2Q8NDA2 5059 aa0.82□□□□□ -2.28
SEC24D-213ENST00000514418 KRTAP19-8Q3LI54 63 aa0.82□□□□□ -2.28
SEC24D-213ENST00000514418 RYR3Q15413 4870 aa0.81□□□□□ -2.28
SEC24D-213ENST00000514418 BIRC6Q9NR09 4857 aa0.81□□□□□ -2.28
SEC24D-213ENST00000514418 UBR4Q5T4S7 5183 aa0.8□□□□□ -2.28
SEC24D-213ENST00000514418 MT1XP80297 61 aa0.8□□□□□ -2.28
SEC24D-213ENST00000514418 PCLOQ9Y6V0 5065 aa0.8□□□□□ -2.28
SEC24D-213ENST00000514418 ABCA13Q86UQ4 5058 aa0.79□□□□□ -2.28
SEC24D-213ENST00000514418 MT1BP07438 61 aa0.78□□□□□ -2.28
SEC24D-213ENST00000514418 HERC2O95714 4834 aa0.78□□□□□ -2.28
SEC24D-213ENST00000514418 KIAA1109Q2LD37 5005 aa0.78□□□□□ -2.29
SEC24D-213ENST00000514418 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
SEC24D-213ENST00000514418 MUC2Q02817 5179 aa0.77□□□□□ -2.29
SEC24D-213ENST00000514418 MT2AP02795 61 aa0.76□□□□□ -2.29
SEC24D-213ENST00000514418 MT1FP04733 61 aa0.76□□□□□ -2.29
SEC24D-213ENST00000514418 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
SEC24D-213ENST00000514418 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
SEC24D-213ENST00000514418 MT1HP80294 61 aa0.74□□□□□ -2.29
SEC24D-213ENST00000514418 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
SEC24D-213ENST00000514418 MT1EP04732 61 aa0.72□□□□□ -2.29
SEC24D-213ENST00000514418 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
SEC24D-213ENST00000514418 FAT4Q6V0I7 4981 aa0.72□□□□□ -2.29
SEC24D-213ENST00000514418 RNF213Q63HN8 5207 aa0.71□□□□□ -2.29
SEC24D-213ENST00000514418 MT1LQ93083 61 aa0.71□□□□□ -2.3
SEC24D-213ENST00000514418 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
SEC24D-213ENST00000514418 M0R2T5 61 aa0.7□□□□□ -2.3
SEC24D-213ENST00000514418 FSIP2Q5CZC0 6907 aa0.69□□□□□ -2.3
SEC24D-213ENST00000514418 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
SEC24D-213ENST00000514418 MT1AP04731 61 aa0.68□□□□□ -2.3
SEC24D-213ENST00000514418 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
SEC24D-213ENST00000514418 NEBP20929 6669 aa0.67□□□□□ -2.3
SEC24D-213ENST00000514418 KMT2DO14686 5537 aa0.66□□□□□ -2.3
SEC24D-213ENST00000514418 PRM1P04553 51 aa0.63□□□□□ -2.31
SEC24D-213ENST00000514418 MT1GP13640 62 aa0.63□□□□□ -2.31
SEC24D-213ENST00000514418 SSPOA2VEC9 5147 aa0.63□□□□□ -2.31
SEC24D-213ENST00000514418 MT1MQ8N339 61 aa0.62□□□□□ -2.31
SEC24D-213ENST00000514418 USH2AO75445 5202 aa0.62□□□□□ -2.31
SEC24D-213ENST00000514418 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
SEC24D-213ENST00000514418 KRTAP6-2Q3LI66 62 aa0.59□□□□□ -2.31
SEC24D-213ENST00000514418 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
SEC24D-213ENST00000514418 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
SEC24D-213ENST00000514418 KRTAP19-6Q3LI70 58 aa0.58□□□□□ -2.32
SEC24D-213ENST00000514418 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
SEC24D-213ENST00000514418 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
SEC24D-213ENST00000514418 KRTAP20-1Q3LI63 56 aa0.57□□□□□ -2.32
SEC24D-213ENST00000514418 SPRR2AP35326 72 aa0.55□□□□□ -2.32
SEC24D-213ENST00000514418 MUC12Q9UKN1 5478 aa0.52□□□□□ -2.33
SEC24D-213ENST00000514418 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
SEC24D-213ENST00000514418 SPRR2EP22531 72 aa0.52□□□□□ -2.33
SEC24D-213ENST00000514418 SPRR2BP35325 72 aa0.52□□□□□ -2.33
SEC24D-213ENST00000514418 SPRR2DP22532 72 aa0.5□□□□□ -2.33
SEC24D-213ENST00000514418 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SEC24D-213ENST00000514418 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SEC24D-213ENST00000514418 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
SEC24D-213ENST00000514418 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
SEC24D-213ENST00000514418 KRTAP20-2Q3LI61 65 aa0.39□□□□□ -2.35
SEC24D-213ENST00000514418 MT4P47944 62 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 9 ms