RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
SEC24D-213ENST00000514418 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
SEC24D-213ENST00000514418 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
SEC24D-213ENST00000514418 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
SEC24D-213ENST00000514418 FOXD1Q16676 465 aa17.62■□□□□ 0.41
SEC24D-213ENST00000514418 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
SEC24D-213ENST00000514418 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
SEC24D-213ENST00000514418 ADRA2BP18089 450 aa16.64■□□□□ 0.25
SEC24D-213ENST00000514418 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
SEC24D-213ENST00000514418 MSH5O43196 834 aa16.33■□□□□ 0.2
SEC24D-213ENST00000514418 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
SEC24D-213ENST00000514418 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
SEC24D-213ENST00000514418 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
SEC24D-213ENST00000514418 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
SEC24D-213ENST00000514418 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0
SEC24D-213ENST00000514418 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
SEC24D-213ENST00000514418 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
SEC24D-213ENST00000514418 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
SEC24D-213ENST00000514418 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
SEC24D-213ENST00000514418 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
SEC24D-213ENST00000514418 KCNA4P22459 653 aa14.44□□□□□ -0.1
SEC24D-213ENST00000514418 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
SEC24D-213ENST00000514418 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
SEC24D-213ENST00000514418 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
SEC24D-213ENST00000514418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.194e-9■■□□□ 11.6
SEC24D-213ENST00000514418 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
SEC24D-213ENST00000514418 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
SEC24D-213ENST00000514418 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
SEC24D-213ENST00000514418 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
SEC24D-213ENST00000514418 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
SEC24D-213ENST00000514418 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
SEC24D-213ENST00000514418 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
SEC24D-213ENST00000514418 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
SEC24D-213ENST00000514418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
SEC24D-213ENST00000514418 ZBTB22O15209 634 aa13.33□□□□□ -0.28
SEC24D-213ENST00000514418 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
SEC24D-213ENST00000514418 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
SEC24D-213ENST00000514418 CAPN15O75808 1086 aa13.25□□□□□ -0.29
SEC24D-213ENST00000514418 APLP2Q06481 763 aa13.24□□□□□ -0.29
SEC24D-213ENST00000514418 DSG3P32926 999 aa13.21□□□□□ -0.29
SEC24D-213ENST00000514418 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
SEC24D-213ENST00000514418 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
SEC24D-213ENST00000514418 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
SEC24D-213ENST00000514418 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
SEC24D-213ENST00000514418 ABCB7O75027 752 aa12.99□□□□□ -0.33
SEC24D-213ENST00000514418 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
SEC24D-213ENST00000514418 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
SEC24D-213ENST00000514418 POLA2Q14181 598 aa12.87□□□□□ -0.35
SEC24D-213ENST00000514418 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
SEC24D-213ENST00000514418 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
SEC24D-213ENST00000514418 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SEC24D-213ENST00000514418 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
SEC24D-213ENST00000514418 FBLN2P98095 1184 aa12.42□□□□□ -0.42
SEC24D-213ENST00000514418 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
SEC24D-213ENST00000514418 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SEC24D-213ENST00000514418 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SEC24D-213ENST00000514418 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
SEC24D-213ENST00000514418 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
SEC24D-213ENST00000514418 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
SEC24D-213ENST00000514418 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
SEC24D-213ENST00000514418 POTEHQ6S545 545 aa12.15□□□□□ -0.46
SEC24D-213ENST00000514418 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
SEC24D-213ENST00000514418 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
SEC24D-213ENST00000514418 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
SEC24D-213ENST00000514418 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
SEC24D-213ENST00000514418 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEC24D-213ENST00000514418 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
SEC24D-213ENST00000514418 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
SEC24D-213ENST00000514418 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
SEC24D-213ENST00000514418 PROM2Q8N271 834 aa11.86□□□□□ -0.51
SEC24D-213ENST00000514418 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
SEC24D-213ENST00000514418 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
SEC24D-213ENST00000514418 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
SEC24D-213ENST00000514418 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
SEC24D-213ENST00000514418 FKBP8Q14318 412 aa11.65□□□□□ -0.54
SEC24D-213ENST00000514418 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
SEC24D-213ENST00000514418 HAX1O00165 279 aa11.58□□□□□ -0.56
SEC24D-213ENST00000514418 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
SEC24D-213ENST00000514418 EVX2Q03828 476 aa11.57□□□□□ -0.56
SEC24D-213ENST00000514418 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
SEC24D-213ENST00000514418 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
SEC24D-213ENST00000514418 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
SEC24D-213ENST00000514418 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
SEC24D-213ENST00000514418 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC24D-213ENST00000514418 MIER1Q8N108 512 aa11.33□□□□□ -0.6
SEC24D-213ENST00000514418 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
SEC24D-213ENST00000514418 GABBR2O75899 941 aa11.29□□□□□ -0.6
SEC24D-213ENST00000514418 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
SEC24D-213ENST00000514418 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
SEC24D-213ENST00000514418 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
SEC24D-213ENST00000514418 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
SEC24D-213ENST00000514418 CLCN6P51797 869 aa11.23□□□□□ -0.61
SEC24D-213ENST00000514418 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
SEC24D-213ENST00000514418 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
SEC24D-213ENST00000514418 NUBP1P53384 320 aa11.19□□□□□ -0.62
SEC24D-213ENST00000514418 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
SEC24D-213ENST00000514418 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
SEC24D-213ENST00000514418 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
SEC24D-213ENST00000514418 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
SEC24D-213ENST00000514418 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms