RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
PRDM16-208ENST00000514189 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
PRDM16-208ENST00000514189 LCE2DQ5TA82 110 aaPredicted RBP4.33□□□□□ -1.72
PRDM16-208ENST00000514189 MT1LQ93083 61 aa4.3□□□□□ -1.72
PRDM16-208ENST00000514189 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
PRDM16-208ENST00000514189 MT1EP04732 61 aa4.26□□□□□ -1.73
PRDM16-208ENST00000514189 SPRR2EP22531 72 aa4.26□□□□□ -1.73
PRDM16-208ENST00000514189 SPRR2BP35325 72 aa4.26□□□□□ -1.73
PRDM16-208ENST00000514189 SPRR2AP35326 72 aa4.26□□□□□ -1.73
PRDM16-208ENST00000514189 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
PRDM16-208ENST00000514189 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
PRDM16-208ENST00000514189 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
PRDM16-208ENST00000514189 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
PRDM16-208ENST00000514189 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
PRDM16-208ENST00000514189 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
PRDM16-208ENST00000514189 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
PRDM16-208ENST00000514189 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
PRDM16-208ENST00000514189 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PRDM16-208ENST00000514189 MT1MQ8N339 61 aa4.09□□□□□ -1.76
PRDM16-208ENST00000514189 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
PRDM16-208ENST00000514189 SPRR2DP22532 72 aa4.06□□□□□ -1.76
PRDM16-208ENST00000514189 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
PRDM16-208ENST00000514189 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
PRDM16-208ENST00000514189 PRM1P04553 51 aa3.91□□□□□ -1.78
PRDM16-208ENST00000514189 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
PRDM16-208ENST00000514189 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
PRDM16-208ENST00000514189 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
PRDM16-208ENST00000514189 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
PRDM16-208ENST00000514189 MT4P47944 62 aa3.83□□□□□ -1.8
PRDM16-208ENST00000514189 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
PRDM16-208ENST00000514189 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
PRDM16-208ENST00000514189 MT3P25713 68 aa3.73□□□□□ -1.81
PRDM16-208ENST00000514189 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
PRDM16-208ENST00000514189 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
PRDM16-208ENST00000514189 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
PRDM16-208ENST00000514189 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
PRDM16-208ENST00000514189 MT1AP04731 61 aa3.67□□□□□ -1.82
PRDM16-208ENST00000514189 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
PRDM16-208ENST00000514189 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
PRDM16-208ENST00000514189 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
PRDM16-208ENST00000514189 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
PRDM16-208ENST00000514189 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
PRDM16-208ENST00000514189 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
PRDM16-208ENST00000514189 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
PRDM16-208ENST00000514189 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
PRDM16-208ENST00000514189 NEBP20929 6669 aa3.33□□□□□ -1.88
PRDM16-208ENST00000514189 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
PRDM16-208ENST00000514189 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PRDM16-208ENST00000514189 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
PRDM16-208ENST00000514189 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PRDM16-208ENST00000514189 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
PRDM16-208ENST00000514189 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
PRDM16-208ENST00000514189 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
PRDM16-208ENST00000514189 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
PRDM16-208ENST00000514189 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
PRDM16-208ENST00000514189 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
PRDM16-208ENST00000514189 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
PRDM16-208ENST00000514189 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
PRDM16-208ENST00000514189 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
PRDM16-208ENST00000514189 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
PRDM16-208ENST00000514189 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
PRDM16-208ENST00000514189 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
PRDM16-208ENST00000514189 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PRDM16-208ENST00000514189 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
PRDM16-208ENST00000514189 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
PRDM16-208ENST00000514189 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
PRDM16-208ENST00000514189 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PRDM16-208ENST00000514189 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
PRDM16-208ENST00000514189 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PRDM16-208ENST00000514189 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PRDM16-208ENST00000514189 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
PRDM16-208ENST00000514189 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
PRDM16-208ENST00000514189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
PRDM16-208ENST00000514189 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
PRDM16-208ENST00000514189 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
PRDM16-208ENST00000514189 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
PRDM16-208ENST00000514189 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 1019.3 ms