RNA–Protein interactions for RNA: ENST00000513978.5

GRAMD2B-214, Transcript of GRAM domain containing 2B, humanhuman

TSL 2

Gene GRAMD2B, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-214ENST00000513978 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
GRAMD2B-214ENST00000513978 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
GRAMD2B-214ENST00000513978 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
GRAMD2B-214ENST00000513978 MT1GP13640 62 aa5.82□□□□□ -1.48
GRAMD2B-214ENST00000513978 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
GRAMD2B-214ENST00000513978 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
GRAMD2B-214ENST00000513978 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
GRAMD2B-214ENST00000513978 MT1MQ8N339 61 aa5.74□□□□□ -1.49
GRAMD2B-214ENST00000513978 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
GRAMD2B-214ENST00000513978 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.49
GRAMD2B-214ENST00000513978 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
GRAMD2B-214ENST00000513978 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
GRAMD2B-214ENST00000513978 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
GRAMD2B-214ENST00000513978 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
GRAMD2B-214ENST00000513978 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
GRAMD2B-214ENST00000513978 SPRR2EP22531 72 aa5.55□□□□□ -1.52
GRAMD2B-214ENST00000513978 SPRR2BP35325 72 aa5.55□□□□□ -1.52
GRAMD2B-214ENST00000513978 SPRR2AP35326 72 aa5.55□□□□□ -1.52
GRAMD2B-214ENST00000513978 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
GRAMD2B-214ENST00000513978 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
GRAMD2B-214ENST00000513978 H3BS24 57 aa5.44□□□□□ -1.54
GRAMD2B-214ENST00000513978 SPRR2DP22532 72 aa5.36□□□□□ -1.55
GRAMD2B-214ENST00000513978 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
GRAMD2B-214ENST00000513978 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
GRAMD2B-214ENST00000513978 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
GRAMD2B-214ENST00000513978 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
GRAMD2B-214ENST00000513978 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
GRAMD2B-214ENST00000513978 NEBP20929 6669 aa5.25□□□□□ -1.57
GRAMD2B-214ENST00000513978 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
GRAMD2B-214ENST00000513978 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
GRAMD2B-214ENST00000513978 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
GRAMD2B-214ENST00000513978 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
GRAMD2B-214ENST00000513978 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
GRAMD2B-214ENST00000513978 MT1AP04731 61 aa5.11□□□□□ -1.59
GRAMD2B-214ENST00000513978 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
GRAMD2B-214ENST00000513978 INE1O15225 51 aa4.99□□□□□ -1.61
GRAMD2B-214ENST00000513978 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
GRAMD2B-214ENST00000513978 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
GRAMD2B-214ENST00000513978 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
GRAMD2B-214ENST00000513978 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
GRAMD2B-214ENST00000513978 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
GRAMD2B-214ENST00000513978 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
GRAMD2B-214ENST00000513978 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
GRAMD2B-214ENST00000513978 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
GRAMD2B-214ENST00000513978 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
GRAMD2B-214ENST00000513978 MT3P25713 68 aa4.64□□□□□ -1.67
GRAMD2B-214ENST00000513978 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
GRAMD2B-214ENST00000513978 MT4P47944 62 aa4.61□□□□□ -1.67
GRAMD2B-214ENST00000513978 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
GRAMD2B-214ENST00000513978 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
GRAMD2B-214ENST00000513978 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
GRAMD2B-214ENST00000513978 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
GRAMD2B-214ENST00000513978 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
GRAMD2B-214ENST00000513978 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
GRAMD2B-214ENST00000513978 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
GRAMD2B-214ENST00000513978 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
GRAMD2B-214ENST00000513978 LCE1EQ5T753 118 aa4□□□□□ -1.77
GRAMD2B-214ENST00000513978 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
GRAMD2B-214ENST00000513978 PRM1P04553 51 aa3.91□□□□□ -1.78
GRAMD2B-214ENST00000513978 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
GRAMD2B-214ENST00000513978 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
GRAMD2B-214ENST00000513978 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
GRAMD2B-214ENST00000513978 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
GRAMD2B-214ENST00000513978 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
GRAMD2B-214ENST00000513978 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
GRAMD2B-214ENST00000513978 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
GRAMD2B-214ENST00000513978 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
GRAMD2B-214ENST00000513978 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
GRAMD2B-214ENST00000513978 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
GRAMD2B-214ENST00000513978 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
GRAMD2B-214ENST00000513978 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
GRAMD2B-214ENST00000513978 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
GRAMD2B-214ENST00000513978 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
GRAMD2B-214ENST00000513978 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
GRAMD2B-214ENST00000513978 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
GRAMD2B-214ENST00000513978 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
GRAMD2B-214ENST00000513978 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
GRAMD2B-214ENST00000513978 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 65.9 ms