RNA–Protein interactions for RNA: ENST00000513604.5

SH3TC2-213, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 4,051 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-213ENST00000513604 MT1EP04732 61 aa3.56□□□□□ -1.84
SH3TC2-213ENST00000513604 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SH3TC2-213ENST00000513604 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
SH3TC2-213ENST00000513604 MT1LQ93083 61 aa3.53□□□□□ -1.84
SH3TC2-213ENST00000513604 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
SH3TC2-213ENST00000513604 MT1GP13640 62 aa3.5□□□□□ -1.85
SH3TC2-213ENST00000513604 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
SH3TC2-213ENST00000513604 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
SH3TC2-213ENST00000513604 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SH3TC2-213ENST00000513604 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SH3TC2-213ENST00000513604 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
SH3TC2-213ENST00000513604 MT1MQ8N339 61 aa3.37□□□□□ -1.87
SH3TC2-213ENST00000513604 SPRR2EP22531 72 aa3.37□□□□□ -1.87
SH3TC2-213ENST00000513604 SPRR2BP35325 72 aa3.37□□□□□ -1.87
SH3TC2-213ENST00000513604 SPRR2AP35326 72 aa3.37□□□□□ -1.87
SH3TC2-213ENST00000513604 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
SH3TC2-213ENST00000513604 INE1O15225 51 aa3.28□□□□□ -1.88
SH3TC2-213ENST00000513604 LCE3BQ5TA77 95 aa3.28□□□□□ -1.89
SH3TC2-213ENST00000513604 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
SH3TC2-213ENST00000513604 SPRR2DP22532 72 aa3.22□□□□□ -1.89
SH3TC2-213ENST00000513604 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
SH3TC2-213ENST00000513604 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
SH3TC2-213ENST00000513604 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
SH3TC2-213ENST00000513604 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
SH3TC2-213ENST00000513604 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
SH3TC2-213ENST00000513604 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
SH3TC2-213ENST00000513604 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
SH3TC2-213ENST00000513604 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
SH3TC2-213ENST00000513604 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SH3TC2-213ENST00000513604 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
SH3TC2-213ENST00000513604 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
SH3TC2-213ENST00000513604 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
SH3TC2-213ENST00000513604 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
SH3TC2-213ENST00000513604 MT1AP04731 61 aa2.96□□□□□ -1.94
SH3TC2-213ENST00000513604 MT4P47944 62 aa2.96□□□□□ -1.94
SH3TC2-213ENST00000513604 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
SH3TC2-213ENST00000513604 NEBP20929 6669 aa2.85□□□□□ -1.95
SH3TC2-213ENST00000513604 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
SH3TC2-213ENST00000513604 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
SH3TC2-213ENST00000513604 MT3P25713 68 aa2.79□□□□□ -1.96
SH3TC2-213ENST00000513604 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SH3TC2-213ENST00000513604 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SH3TC2-213ENST00000513604 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
SH3TC2-213ENST00000513604 PRM1P04553 51 aa2.68□□□□□ -1.98
SH3TC2-213ENST00000513604 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
SH3TC2-213ENST00000513604 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
SH3TC2-213ENST00000513604 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
SH3TC2-213ENST00000513604 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
SH3TC2-213ENST00000513604 LCE4AQ5TA78 99 aa2.58□□□□□ -2
SH3TC2-213ENST00000513604 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
SH3TC2-213ENST00000513604 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
SH3TC2-213ENST00000513604 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
SH3TC2-213ENST00000513604 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
SH3TC2-213ENST00000513604 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SH3TC2-213ENST00000513604 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
SH3TC2-213ENST00000513604 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
SH3TC2-213ENST00000513604 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
SH3TC2-213ENST00000513604 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
SH3TC2-213ENST00000513604 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SH3TC2-213ENST00000513604 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
SH3TC2-213ENST00000513604 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
SH3TC2-213ENST00000513604 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
SH3TC2-213ENST00000513604 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SH3TC2-213ENST00000513604 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
SH3TC2-213ENST00000513604 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
SH3TC2-213ENST00000513604 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
SH3TC2-213ENST00000513604 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
SH3TC2-213ENST00000513604 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SH3TC2-213ENST00000513604 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
SH3TC2-213ENST00000513604 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
SH3TC2-213ENST00000513604 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
SH3TC2-213ENST00000513604 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SH3TC2-213ENST00000513604 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.72□□□□□ -2.13
SH3TC2-213ENST00000513604 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
SH3TC2-213ENST00000513604 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SH3TC2-213ENST00000513604 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
SH3TC2-213ENST00000513604 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
SH3TC2-213ENST00000513604 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 77.9 ms