RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
CLOCK-211ENST00000513440 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
CLOCK-211ENST00000513440 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
CLOCK-211ENST00000513440 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
CLOCK-211ENST00000513440 MT1GP13640 62 aa4.68□□□□□ -1.66
CLOCK-211ENST00000513440 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
CLOCK-211ENST00000513440 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
CLOCK-211ENST00000513440 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
CLOCK-211ENST00000513440 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
CLOCK-211ENST00000513440 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.68
CLOCK-211ENST00000513440 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CLOCK-211ENST00000513440 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
CLOCK-211ENST00000513440 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
CLOCK-211ENST00000513440 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
CLOCK-211ENST00000513440 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
CLOCK-211ENST00000513440 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
CLOCK-211ENST00000513440 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
CLOCK-211ENST00000513440 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
CLOCK-211ENST00000513440 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
CLOCK-211ENST00000513440 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
CLOCK-211ENST00000513440 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
CLOCK-211ENST00000513440 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
CLOCK-211ENST00000513440 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CLOCK-211ENST00000513440 SPRR2EP22531 72 aa4.15□□□□□ -1.74
CLOCK-211ENST00000513440 SPRR2BP35325 72 aa4.15□□□□□ -1.74
CLOCK-211ENST00000513440 SPRR2AP35326 72 aa4.15□□□□□ -1.74
CLOCK-211ENST00000513440 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
CLOCK-211ENST00000513440 MT1AP04731 61 aa4.05□□□□□ -1.76
CLOCK-211ENST00000513440 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
CLOCK-211ENST00000513440 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CLOCK-211ENST00000513440 SPRR2DP22532 72 aa3.96□□□□□ -1.78
CLOCK-211ENST00000513440 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CLOCK-211ENST00000513440 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CLOCK-211ENST00000513440 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
CLOCK-211ENST00000513440 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
CLOCK-211ENST00000513440 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
CLOCK-211ENST00000513440 PRM1P04553 51 aa3.81□□□□□ -1.8
CLOCK-211ENST00000513440 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
CLOCK-211ENST00000513440 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
CLOCK-211ENST00000513440 MT3P25713 68 aa3.67□□□□□ -1.82
CLOCK-211ENST00000513440 MT4P47944 62 aa3.6□□□□□ -1.83
CLOCK-211ENST00000513440 NEBP20929 6669 aa3.59□□□□□ -1.83
CLOCK-211ENST00000513440 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
CLOCK-211ENST00000513440 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
CLOCK-211ENST00000513440 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
CLOCK-211ENST00000513440 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
CLOCK-211ENST00000513440 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
CLOCK-211ENST00000513440 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
CLOCK-211ENST00000513440 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
CLOCK-211ENST00000513440 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
CLOCK-211ENST00000513440 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CLOCK-211ENST00000513440 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CLOCK-211ENST00000513440 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
CLOCK-211ENST00000513440 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.9
CLOCK-211ENST00000513440 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
CLOCK-211ENST00000513440 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
CLOCK-211ENST00000513440 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
CLOCK-211ENST00000513440 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
CLOCK-211ENST00000513440 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
CLOCK-211ENST00000513440 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
CLOCK-211ENST00000513440 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
CLOCK-211ENST00000513440 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CLOCK-211ENST00000513440 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
CLOCK-211ENST00000513440 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
CLOCK-211ENST00000513440 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CLOCK-211ENST00000513440 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CLOCK-211ENST00000513440 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CLOCK-211ENST00000513440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
CLOCK-211ENST00000513440 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
CLOCK-211ENST00000513440 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CLOCK-211ENST00000513440 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
CLOCK-211ENST00000513440 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
CLOCK-211ENST00000513440 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
CLOCK-211ENST00000513440 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CLOCK-211ENST00000513440 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
CLOCK-211ENST00000513440 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
CLOCK-211ENST00000513440 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms