RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
DDR1-271ENST00000513240 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
DDR1-271ENST00000513240 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
DDR1-271ENST00000513240 MT1EP04732 61 aa5.03□□□□□ -1.6
DDR1-271ENST00000513240 MT1LQ93083 61 aa5.03□□□□□ -1.6
DDR1-271ENST00000513240 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
DDR1-271ENST00000513240 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
DDR1-271ENST00000513240 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
DDR1-271ENST00000513240 MT1GP13640 62 aa4.91□□□□□ -1.62
DDR1-271ENST00000513240 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
DDR1-271ENST00000513240 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
DDR1-271ENST00000513240 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
DDR1-271ENST00000513240 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
DDR1-271ENST00000513240 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
DDR1-271ENST00000513240 MT1MQ8N339 61 aa4.72□□□□□ -1.65
DDR1-271ENST00000513240 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
DDR1-271ENST00000513240 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
DDR1-271ENST00000513240 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
DDR1-271ENST00000513240 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
DDR1-271ENST00000513240 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
DDR1-271ENST00000513240 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
DDR1-271ENST00000513240 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
DDR1-271ENST00000513240 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.72
DDR1-271ENST00000513240 PRM1P04553 51 aa4.32□□□□□ -1.72
DDR1-271ENST00000513240 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
DDR1-271ENST00000513240 SPRR2EP22531 72 aa4.31□□□□□ -1.72
DDR1-271ENST00000513240 SPRR2BP35325 72 aa4.31□□□□□ -1.72
DDR1-271ENST00000513240 SPRR2AP35326 72 aa4.31□□□□□ -1.72
DDR1-271ENST00000513240 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
DDR1-271ENST00000513240 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
DDR1-271ENST00000513240 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
DDR1-271ENST00000513240 MT1AP04731 61 aa4.12□□□□□ -1.75
DDR1-271ENST00000513240 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
DDR1-271ENST00000513240 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
DDR1-271ENST00000513240 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
DDR1-271ENST00000513240 SPRR2DP22532 72 aa4.09□□□□□ -1.75
DDR1-271ENST00000513240 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
DDR1-271ENST00000513240 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
DDR1-271ENST00000513240 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
DDR1-271ENST00000513240 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.77
DDR1-271ENST00000513240 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
DDR1-271ENST00000513240 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
DDR1-271ENST00000513240 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
DDR1-271ENST00000513240 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
DDR1-271ENST00000513240 MT4P47944 62 aa3.81□□□□□ -1.8
DDR1-271ENST00000513240 NEBP20929 6669 aa3.79□□□□□ -1.8
DDR1-271ENST00000513240 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
DDR1-271ENST00000513240 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
DDR1-271ENST00000513240 MT3P25713 68 aa3.73□□□□□ -1.81
DDR1-271ENST00000513240 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
DDR1-271ENST00000513240 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
DDR1-271ENST00000513240 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
DDR1-271ENST00000513240 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
DDR1-271ENST00000513240 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
DDR1-271ENST00000513240 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
DDR1-271ENST00000513240 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
DDR1-271ENST00000513240 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
DDR1-271ENST00000513240 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
DDR1-271ENST00000513240 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
DDR1-271ENST00000513240 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.93
DDR1-271ENST00000513240 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
DDR1-271ENST00000513240 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
DDR1-271ENST00000513240 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
DDR1-271ENST00000513240 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.94
DDR1-271ENST00000513240 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
DDR1-271ENST00000513240 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
DDR1-271ENST00000513240 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
DDR1-271ENST00000513240 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
DDR1-271ENST00000513240 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
DDR1-271ENST00000513240 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
DDR1-271ENST00000513240 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
DDR1-271ENST00000513240 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
DDR1-271ENST00000513240 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
DDR1-271ENST00000513240 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
DDR1-271ENST00000513240 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
DDR1-271ENST00000513240 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
DDR1-271ENST00000513240 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms