RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-208ENST00000512701 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TTC39B-208ENST00000512701 HERC1Q15751 4861 aa2.36□□□□□ -2.03
TTC39B-208ENST00000512701 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
TTC39B-208ENST00000512701 KRTAP9-6A0A140TA67 174 aa2.35□□□□□ -2.03
TTC39B-208ENST00000512701 TNXBP22105 4242 aa2.34□□□□□ -2.03
TTC39B-208ENST00000512701 MT1MQ8N339 61 aa2.33□□□□□ -2.04
TTC39B-208ENST00000512701 LCE1DQ5T752 114 aa2.33□□□□□ -2.04
TTC39B-208ENST00000512701 LCE2DQ5TA82 110 aaPredicted RBP2.31□□□□□ -2.04
TTC39B-208ENST00000512701 MUC2Q02817 5179 aa2.3□□□□□ -2.04
TTC39B-208ENST00000512701 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
TTC39B-208ENST00000512701 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
TTC39B-208ENST00000512701 MT3P25713 68 aa2.22□□□□□ -2.05
TTC39B-208ENST00000512701 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
TTC39B-208ENST00000512701 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
TTC39B-208ENST00000512701 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
TTC39B-208ENST00000512701 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.06
TTC39B-208ENST00000512701 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
TTC39B-208ENST00000512701 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
TTC39B-208ENST00000512701 USH2AO75445 5202 aa2.12□□□□□ -2.07
TTC39B-208ENST00000512701 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
TTC39B-208ENST00000512701 KMT2DO14686 5537 aa2.11□□□□□ -2.07
TTC39B-208ENST00000512701 MT1AP04731 61 aa2.11□□□□□ -2.07
TTC39B-208ENST00000512701 KRTAP4-6Q9BYQ5 205 aa2.09□□□□□ -2.08
TTC39B-208ENST00000512701 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.08□□□□□ -2.08
TTC39B-208ENST00000512701 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
TTC39B-208ENST00000512701 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
TTC39B-208ENST00000512701 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
TTC39B-208ENST00000512701 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
TTC39B-208ENST00000512701 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
TTC39B-208ENST00000512701 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
TTC39B-208ENST00000512701 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
TTC39B-208ENST00000512701 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
TTC39B-208ENST00000512701 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
TTC39B-208ENST00000512701 LCE4AQ5TA78 99 aa1.95□□□□□ -2.1
TTC39B-208ENST00000512701 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
TTC39B-208ENST00000512701 KRTAP2-2Q9BYT5 123 aa1.91□□□□□ -2.1
TTC39B-208ENST00000512701 LCE2AQ5TA79 106 aaPredicted RBP1.89□□□□□ -2.11
TTC39B-208ENST00000512701 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
TTC39B-208ENST00000512701 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
TTC39B-208ENST00000512701 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
TTC39B-208ENST00000512701 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
TTC39B-208ENST00000512701 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
TTC39B-208ENST00000512701 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
TTC39B-208ENST00000512701 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
TTC39B-208ENST00000512701 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
TTC39B-208ENST00000512701 KRTAP9-9Q9BYP9 154 aa1.59□□□□□ -2.15
TTC39B-208ENST00000512701 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
TTC39B-208ENST00000512701 NEBP20929 6669 aa1.51□□□□□ -2.17
TTC39B-208ENST00000512701 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
TTC39B-208ENST00000512701 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
TTC39B-208ENST00000512701 KRTAP5-9P26371 169 aa1.4□□□□□ -2.19
TTC39B-208ENST00000512701 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
TTC39B-208ENST00000512701 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
TTC39B-208ENST00000512701 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
TTC39B-208ENST00000512701 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
TTC39B-208ENST00000512701 KRTAP5-3Q6L8H2 238 aa1.27□□□□□ -2.21
TTC39B-208ENST00000512701 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
TTC39B-208ENST00000512701 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
TTC39B-208ENST00000512701 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
TTC39B-208ENST00000512701 GPR98Q8WXG9 6306 aa1.12□□□□□ -2.23
TTC39B-208ENST00000512701 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
TTC39B-208ENST00000512701 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
TTC39B-208ENST00000512701 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.25
TTC39B-208ENST00000512701 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
TTC39B-208ENST00000512701 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
TTC39B-208ENST00000512701 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
TTC39B-208ENST00000512701 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
TTC39B-208ENST00000512701 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.88□□□□□ -2.27
TTC39B-208ENST00000512701 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
TTC39B-208ENST00000512701 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms