RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
USP46-208ENST00000512656 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
USP46-208ENST00000512656 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
USP46-208ENST00000512656 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
USP46-208ENST00000512656 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
USP46-208ENST00000512656 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
USP46-208ENST00000512656 SNURFQ9Y675 71 aa2.68□□□□□ -1.98
USP46-208ENST00000512656 MT1EP04732 61 aa2.67□□□□□ -1.98
USP46-208ENST00000512656 SEC61GP60059 68 aa2.66□□□□□ -1.98
USP46-208ENST00000512656 K7ERU9 68 aa2.65□□□□□ -1.99
USP46-208ENST00000512656 SERP1Q9Y6X1 66 aa2.65□□□□□ -1.99
USP46-208ENST00000512656 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
USP46-208ENST00000512656 A0A0D9SG42 100 aa2.63□□□□□ -1.99
USP46-208ENST00000512656 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
USP46-208ENST00000512656 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
USP46-208ENST00000512656 MT1GP13640 62 aa2.62□□□□□ -1.99
USP46-208ENST00000512656 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
USP46-208ENST00000512656 SERP2Q8N6R1 65 aa2.62□□□□□ -1.99
USP46-208ENST00000512656 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
USP46-208ENST00000512656 COA5Q86WW8 74 aa2.61□□□□□ -1.99
USP46-208ENST00000512656 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
USP46-208ENST00000512656 A0A1B0GU33 70 aa2.59□□□□□ -1.99
USP46-208ENST00000512656 SPATA8Q6RVD6 105 aa2.58□□□□□ -2
USP46-208ENST00000512656 KRTAP12-1P59990 96 aa2.56□□□□□ -2
USP46-208ENST00000512656 MT1MQ8N339 61 aa2.55□□□□□ -2
USP46-208ENST00000512656 SMIM26A0A096LP01 95 aa2.54□□□□□ -2
USP46-208ENST00000512656 MT4P47944 62 aa2.54□□□□□ -2
USP46-208ENST00000512656 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
USP46-208ENST00000512656 MT1LQ93083 61 aa2.53□□□□□ -2
USP46-208ENST00000512656 TNP1P09430 55 aa2.51□□□□□ -2.01
USP46-208ENST00000512656 A0A1B0GU69 56 aa2.5□□□□□ -2.01
USP46-208ENST00000512656 COX7CP15954 63 aa2.49□□□□□ -2.01
USP46-208ENST00000512656 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
USP46-208ENST00000512656 H7BZZ5 65 aa2.47□□□□□ -2.01
USP46-208ENST00000512656 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
USP46-208ENST00000512656 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
USP46-208ENST00000512656 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
USP46-208ENST00000512656 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
USP46-208ENST00000512656 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
USP46-208ENST00000512656 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
USP46-208ENST00000512656 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
USP46-208ENST00000512656 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
USP46-208ENST00000512656 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
USP46-208ENST00000512656 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
USP46-208ENST00000512656 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
USP46-208ENST00000512656 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
USP46-208ENST00000512656 UQCR11O14957 56 aa2.32□□□□□ -2.04
USP46-208ENST00000512656 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
USP46-208ENST00000512656 K7ERS5 55 aa2.28□□□□□ -2.04
USP46-208ENST00000512656 CCDC179H3BU77 68 aa2.27□□□□□ -2.05
USP46-208ENST00000512656 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
USP46-208ENST00000512656 MIR22HGQ0VDD5 57 aa2.25□□□□□ -2.05
USP46-208ENST00000512656 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
USP46-208ENST00000512656 TMEM258P61165 79 aa2.22□□□□□ -2.05
USP46-208ENST00000512656 MT1AP04731 61 aa2.16□□□□□ -2.06
USP46-208ENST00000512656 V9GYY9 64 aa2.16□□□□□ -2.06
USP46-208ENST00000512656 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
USP46-208ENST00000512656 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
USP46-208ENST00000512656 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
USP46-208ENST00000512656 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
USP46-208ENST00000512656 PSPHP1O15172 72 aa2.12□□□□□ -2.07
USP46-208ENST00000512656 RPS28P62857 69 aaKnown RBP2.11□□□□□ -2.07
USP46-208ENST00000512656 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
USP46-208ENST00000512656 Q1T7F1 81 aa2.09□□□□□ -2.07
USP46-208ENST00000512656 A6NED7 52 aa2.07□□□□□ -2.08
USP46-208ENST00000512656 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
USP46-208ENST00000512656 ROMO1P60602 79 aa2.06□□□□□ -2.08
USP46-208ENST00000512656 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
USP46-208ENST00000512656 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
USP46-208ENST00000512656 PMAIP1Q13794 54 aa1.54□□□□□ -2.16
USP46-208ENST00000512656 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
USP46-208ENST00000512656 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
USP46-208ENST00000512656 KTN1-AS1Q86SY8 53 aa1.44□□□□□ -2.18
USP46-208ENST00000512656 LUZP6Q538Z0 58 aa1.34□□□□□ -2.19
USP46-208ENST00000512656 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
USP46-208ENST00000512656 PRM1P04553 51 aa1.02□□□□□ -2.25
USP46-208ENST00000512656 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
USP46-208ENST00000512656 INE1O15225 51 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 60.6 ms