RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
DDX41-213ENST00000512027 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
DDX41-213ENST00000512027 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
DDX41-213ENST00000512027 PSPHP1O15172 72 aa5.72□□□□□ -1.49
DDX41-213ENST00000512027 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
DDX41-213ENST00000512027 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
DDX41-213ENST00000512027 LCE1DQ5T752 114 aa5.65□□□□□ -1.5
DDX41-213ENST00000512027 Q1T7F1 81 aa5.64□□□□□ -1.51
DDX41-213ENST00000512027 V9GYY9 64 aa5.63□□□□□ -1.51
DDX41-213ENST00000512027 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
DDX41-213ENST00000512027 MT4P47944 62 aa5.6□□□□□ -1.51
DDX41-213ENST00000512027 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
DDX41-213ENST00000512027 K7ERS5 55 aa5.59□□□□□ -1.51
DDX41-213ENST00000512027 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
DDX41-213ENST00000512027 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
DDX41-213ENST00000512027 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
DDX41-213ENST00000512027 PCP4P48539 62 aa5.51□□□□□ -1.53
DDX41-213ENST00000512027 A6NED7 52 aa5.49□□□□□ -1.53
DDX41-213ENST00000512027 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
DDX41-213ENST00000512027 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
DDX41-213ENST00000512027 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
DDX41-213ENST00000512027 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
DDX41-213ENST00000512027 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
DDX41-213ENST00000512027 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
DDX41-213ENST00000512027 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
DDX41-213ENST00000512027 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
DDX41-213ENST00000512027 ROMO1P60602 79 aa5.27□□□□□ -1.57
DDX41-213ENST00000512027 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
DDX41-213ENST00000512027 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
DDX41-213ENST00000512027 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
DDX41-213ENST00000512027 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
DDX41-213ENST00000512027 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
DDX41-213ENST00000512027 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
DDX41-213ENST00000512027 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
DDX41-213ENST00000512027 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
DDX41-213ENST00000512027 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
DDX41-213ENST00000512027 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
DDX41-213ENST00000512027 MT1AP04731 61 aa4.99□□□□□ -1.61
DDX41-213ENST00000512027 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
DDX41-213ENST00000512027 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
DDX41-213ENST00000512027 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
DDX41-213ENST00000512027 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
DDX41-213ENST00000512027 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
DDX41-213ENST00000512027 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
DDX41-213ENST00000512027 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
DDX41-213ENST00000512027 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
DDX41-213ENST00000512027 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
DDX41-213ENST00000512027 MT3P25713 68 aa4.53□□□□□ -1.68
DDX41-213ENST00000512027 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
DDX41-213ENST00000512027 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
DDX41-213ENST00000512027 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
DDX41-213ENST00000512027 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
DDX41-213ENST00000512027 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
DDX41-213ENST00000512027 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
DDX41-213ENST00000512027 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
DDX41-213ENST00000512027 H3BS24 57 aa4.18□□□□□ -1.74
DDX41-213ENST00000512027 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
DDX41-213ENST00000512027 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
DDX41-213ENST00000512027 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
DDX41-213ENST00000512027 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
DDX41-213ENST00000512027 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
DDX41-213ENST00000512027 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
DDX41-213ENST00000512027 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
DDX41-213ENST00000512027 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
DDX41-213ENST00000512027 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
DDX41-213ENST00000512027 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
DDX41-213ENST00000512027 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
DDX41-213ENST00000512027 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
DDX41-213ENST00000512027 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
DDX41-213ENST00000512027 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
DDX41-213ENST00000512027 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
DDX41-213ENST00000512027 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
DDX41-213ENST00000512027 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
DDX41-213ENST00000512027 INE1O15225 51 aa2.88□□□□□ -1.95
DDX41-213ENST00000512027 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
DDX41-213ENST00000512027 PRM1P04553 51 aa2.73□□□□□ -1.97
DDX41-213ENST00000512027 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
DDX41-213ENST00000512027 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms