RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
RNF4-215ENST00000511843 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
RNF4-215ENST00000511843 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
RNF4-215ENST00000511843 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
RNF4-215ENST00000511843 PSPHP1O15172 72 aa4.59□□□□□ -1.67
RNF4-215ENST00000511843 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
RNF4-215ENST00000511843 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
RNF4-215ENST00000511843 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
RNF4-215ENST00000511843 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
RNF4-215ENST00000511843 MT4P47944 62 aa4.54□□□□□ -1.68
RNF4-215ENST00000511843 Q1T7F1 81 aa4.51□□□□□ -1.69
RNF4-215ENST00000511843 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
RNF4-215ENST00000511843 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
RNF4-215ENST00000511843 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
RNF4-215ENST00000511843 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
RNF4-215ENST00000511843 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
RNF4-215ENST00000511843 V9GYY9 64 aa4.49□□□□□ -1.69
RNF4-215ENST00000511843 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
RNF4-215ENST00000511843 K7ERS5 55 aa4.48□□□□□ -1.69
RNF4-215ENST00000511843 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
RNF4-215ENST00000511843 A6NED7 52 aa4.4□□□□□ -1.71
RNF4-215ENST00000511843 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
RNF4-215ENST00000511843 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
RNF4-215ENST00000511843 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
RNF4-215ENST00000511843 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
RNF4-215ENST00000511843 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
RNF4-215ENST00000511843 PCP4P48539 62 aa4.25□□□□□ -1.73
RNF4-215ENST00000511843 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
RNF4-215ENST00000511843 ROMO1P60602 79 aa4.22□□□□□ -1.73
RNF4-215ENST00000511843 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
RNF4-215ENST00000511843 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
RNF4-215ENST00000511843 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
RNF4-215ENST00000511843 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
RNF4-215ENST00000511843 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
RNF4-215ENST00000511843 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
RNF4-215ENST00000511843 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
RNF4-215ENST00000511843 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
RNF4-215ENST00000511843 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
RNF4-215ENST00000511843 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
RNF4-215ENST00000511843 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
RNF4-215ENST00000511843 MT1AP04731 61 aa4.02□□□□□ -1.77
RNF4-215ENST00000511843 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
RNF4-215ENST00000511843 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
RNF4-215ENST00000511843 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
RNF4-215ENST00000511843 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
RNF4-215ENST00000511843 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
RNF4-215ENST00000511843 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
RNF4-215ENST00000511843 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
RNF4-215ENST00000511843 MT3P25713 68 aa3.65□□□□□ -1.83
RNF4-215ENST00000511843 SVIPQ8NHG7 77 aa3.64□□□□□ -1.83
RNF4-215ENST00000511843 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
RNF4-215ENST00000511843 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
RNF4-215ENST00000511843 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
RNF4-215ENST00000511843 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
RNF4-215ENST00000511843 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
RNF4-215ENST00000511843 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
RNF4-215ENST00000511843 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
RNF4-215ENST00000511843 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
RNF4-215ENST00000511843 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
RNF4-215ENST00000511843 H3BS24 57 aa3.19□□□□□ -1.9
RNF4-215ENST00000511843 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
RNF4-215ENST00000511843 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
RNF4-215ENST00000511843 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
RNF4-215ENST00000511843 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
RNF4-215ENST00000511843 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
RNF4-215ENST00000511843 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
RNF4-215ENST00000511843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
RNF4-215ENST00000511843 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
RNF4-215ENST00000511843 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
RNF4-215ENST00000511843 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
RNF4-215ENST00000511843 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
RNF4-215ENST00000511843 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
RNF4-215ENST00000511843 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
RNF4-215ENST00000511843 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
RNF4-215ENST00000511843 PRM1P04553 51 aa2.19□□□□□ -2.06
RNF4-215ENST00000511843 INE1O15225 51 aa1.87□□□□□ -2.11
RNF4-215ENST00000511843 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
RNF4-215ENST00000511843 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms