RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 RYR2Q92736 4967 aa0.87□□□□□ -2.27
XRCC4-205ENST00000511817 DNHD1Q96M86 4753 aa0.87□□□□□ -2.27
XRCC4-205ENST00000511817 FAT1Q14517 4588 aa0.87□□□□□ -2.27
XRCC4-205ENST00000511817 LRP1Q07954 4544 aaKnown RBP0.86□□□□□ -2.27
XRCC4-205ENST00000511817 FAT3Q8TDW7 4589 aa0.86□□□□□ -2.27
XRCC4-205ENST00000511817 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
XRCC4-205ENST00000511817 HSPG2P98160 4391 aa0.85□□□□□ -2.27
XRCC4-205ENST00000511817 TNP1P09430 55 aa0.85□□□□□ -2.27
XRCC4-205ENST00000511817 KRTAP6-3Q3LI67 103 aa0.85□□□□□ -2.27
XRCC4-205ENST00000511817 RYR1P21817 5038 aa0.83□□□□□ -2.28
XRCC4-205ENST00000511817 KMT2CQ8NEZ4 4911 aaKnown RBP0.82□□□□□ -2.28
XRCC4-205ENST00000511817 MYCBP2O75592 4640 aa0.82□□□□□ -2.28
XRCC4-205ENST00000511817 LRP2P98164 4655 aa0.82□□□□□ -2.28
XRCC4-205ENST00000511817 LPAP08519 4548 aa0.82□□□□□ -2.28
XRCC4-205ENST00000511817 MACF1Q9UPN3 7388 aaKnown RBP0.8□□□□□ -2.28
XRCC4-205ENST00000511817 RYR3Q15413 4870 aa0.8□□□□□ -2.28
XRCC4-205ENST00000511817 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
XRCC4-205ENST00000511817 ABCA13Q86UQ4 5058 aa0.8□□□□□ -2.28
XRCC4-205ENST00000511817 KIAA1109Q2LD37 5005 aa0.79□□□□□ -2.28
XRCC4-205ENST00000511817 M0R2T5 61 aa0.79□□□□□ -2.28
XRCC4-205ENST00000511817 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
XRCC4-205ENST00000511817 KRTAP12-3P60328 96 aa0.78□□□□□ -2.28
XRCC4-205ENST00000511817 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
XRCC4-205ENST00000511817 MT2AP02795 61 aa0.77□□□□□ -2.29
XRCC4-205ENST00000511817 MT1FP04733 61 aa0.77□□□□□ -2.29
XRCC4-205ENST00000511817 MT1HP80294 61 aa0.77□□□□□ -2.29
XRCC4-205ENST00000511817 KRTAP19-8Q3LI54 63 aa0.77□□□□□ -2.29
XRCC4-205ENST00000511817 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
XRCC4-205ENST00000511817 EPPK1P58107 5090 aaKnown RBP0.76□□□□□ -2.29
XRCC4-205ENST00000511817 MT1BP07438 61 aa0.75□□□□□ -2.29
XRCC4-205ENST00000511817 MT1XP80297 61 aa0.75□□□□□ -2.29
XRCC4-205ENST00000511817 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
XRCC4-205ENST00000511817 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
XRCC4-205ENST00000511817 HERC1Q15751 4861 aa0.73□□□□□ -2.29
XRCC4-205ENST00000511817 BIRC6Q9NR09 4857 aa0.73□□□□□ -2.29
XRCC4-205ENST00000511817 KRTAP19-5Q3LI72 72 aa0.72□□□□□ -2.29
XRCC4-205ENST00000511817 PCLOQ9Y6V0 5065 aa0.72□□□□□ -2.29
XRCC4-205ENST00000511817 HERC2O95714 4834 aa0.71□□□□□ -2.3
XRCC4-205ENST00000511817 MUC2Q02817 5179 aa0.69□□□□□ -2.3
XRCC4-205ENST00000511817 SYNE2Q8WXH0 6885 aaKnown RBP0.69□□□□□ -2.3
XRCC4-205ENST00000511817 HMCN2Q8NDA2 5059 aa0.68□□□□□ -2.3
XRCC4-205ENST00000511817 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
XRCC4-205ENST00000511817 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
XRCC4-205ENST00000511817 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
XRCC4-205ENST00000511817 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
XRCC4-205ENST00000511817 UBR4Q5T4S7 5183 aa0.66□□□□□ -2.3
XRCC4-205ENST00000511817 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
XRCC4-205ENST00000511817 MT1LQ93083 61 aa0.66□□□□□ -2.3
XRCC4-205ENST00000511817 MT1EP04732 61 aa0.65□□□□□ -2.31
XRCC4-205ENST00000511817 RNF213Q63HN8 5207 aa0.65□□□□□ -2.31
XRCC4-205ENST00000511817 KMT2DO14686 5537 aa0.62□□□□□ -2.31
XRCC4-205ENST00000511817 MT1GP13640 62 aa0.62□□□□□ -2.31
XRCC4-205ENST00000511817 MT1MQ8N339 61 aa0.61□□□□□ -2.31
XRCC4-205ENST00000511817 KRTAP19-6Q3LI70 58 aa0.6□□□□□ -2.31
XRCC4-205ENST00000511817 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
XRCC4-205ENST00000511817 FSIP2Q5CZC0 6907 aa0.58□□□□□ -2.32
XRCC4-205ENST00000511817 SSPOA2VEC9 5147 aa0.58□□□□□ -2.32
XRCC4-205ENST00000511817 MT1AP04731 61 aa0.56□□□□□ -2.32
XRCC4-205ENST00000511817 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
XRCC4-205ENST00000511817 USH2AO75445 5202 aa0.56□□□□□ -2.32
XRCC4-205ENST00000511817 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
XRCC4-205ENST00000511817 PRM1P04553 51 aa0.54□□□□□ -2.32
XRCC4-205ENST00000511817 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
XRCC4-205ENST00000511817 SPRR2EP22531 72 aa0.51□□□□□ -2.33
XRCC4-205ENST00000511817 SPRR2BP35325 72 aa0.51□□□□□ -2.33
XRCC4-205ENST00000511817 SPRR2AP35326 72 aa0.51□□□□□ -2.33
XRCC4-205ENST00000511817 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
XRCC4-205ENST00000511817 SPRR2DP22532 72 aa0.49□□□□□ -2.33
XRCC4-205ENST00000511817 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
XRCC4-205ENST00000511817 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
XRCC4-205ENST00000511817 MT4P47944 62 aa0.43□□□□□ -2.34
XRCC4-205ENST00000511817 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
XRCC4-205ENST00000511817 NEBP20929 6669 aa0.42□□□□□ -2.34
XRCC4-205ENST00000511817 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
XRCC4-205ENST00000511817 KRTAP20-1Q3LI63 56 aa0.38□□□□□ -2.35
XRCC4-205ENST00000511817 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
XRCC4-205ENST00000511817 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 79.1 ms