RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 MGAM2Q2M2H8 2515 aa0.77□□□□□ -2.29
CHD1-206ENST00000511067 HERC1Q15751 4861 aa0.76□□□□□ -2.29
CHD1-206ENST00000511067 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
CHD1-206ENST00000511067 RPS29P62273 56 aaKnown RBP0.75□□□□□ -2.29
CHD1-206ENST00000511067 LPAP08519 4548 aa0.75□□□□□ -2.29
CHD1-206ENST00000511067 MUC17Q685J3 4493 aa0.74□□□□□ -2.29
CHD1-206ENST00000511067 UBE2DNLQ8IWF7 75 aa0.74□□□□□ -2.29
CHD1-206ENST00000511067 C9orf92A6NGG3 77 aa0.73□□□□□ -2.29
CHD1-206ENST00000511067 DNHD1Q96M86 4753 aa0.73□□□□□ -2.29
CHD1-206ENST00000511067 RYR2Q92736 4967 aa0.72□□□□□ -2.29
CHD1-206ENST00000511067 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
CHD1-206ENST00000511067 KMT2CQ8NEZ4 4911 aaKnown RBP0.72□□□□□ -2.29
CHD1-206ENST00000511067 M0QZ58 72 aa0.71□□□□□ -2.3
CHD1-206ENST00000511067 RYR1P21817 5038 aa0.71□□□□□ -2.3
CHD1-206ENST00000511067 RYR3Q15413 4870 aa0.7□□□□□ -2.3
CHD1-206ENST00000511067 LRP2P98164 4655 aa0.69□□□□□ -2.3
CHD1-206ENST00000511067 ABCA13Q86UQ4 5058 aa0.68□□□□□ -2.3
CHD1-206ENST00000511067 BIRC6Q9NR09 4857 aa0.67□□□□□ -2.3
CHD1-206ENST00000511067 PCLOQ9Y6V0 5065 aa0.67□□□□□ -2.3
CHD1-206ENST00000511067 Q5VSD8 79 aa0.67□□□□□ -2.3
CHD1-206ENST00000511067 MUC2Q02817 5179 aa0.66□□□□□ -2.3
CHD1-206ENST00000511067 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
CHD1-206ENST00000511067 UBR4Q5T4S7 5183 aa0.66□□□□□ -2.3
CHD1-206ENST00000511067 KIAA1109Q2LD37 5005 aa0.65□□□□□ -2.3
CHD1-206ENST00000511067 HMCN2Q8NDA2 5059 aa0.65□□□□□ -2.3
CHD1-206ENST00000511067 DMBT1Q9UGM3 2413 aaPredicted RBP0.65□□□□□ -2.31
CHD1-206ENST00000511067 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
CHD1-206ENST00000511067 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
CHD1-206ENST00000511067 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
CHD1-206ENST00000511067 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.31
CHD1-206ENST00000511067 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
CHD1-206ENST00000511067 HERC2O95714 4834 aa0.64□□□□□ -2.31
CHD1-206ENST00000511067 TNP1P09430 55 aa0.63□□□□□ -2.31
CHD1-206ENST00000511067 MT1HL1P0DM35 61 aa0.62□□□□□ -2.31
CHD1-206ENST00000511067 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
CHD1-206ENST00000511067 RNF213Q63HN8 5207 aa0.61□□□□□ -2.31
CHD1-206ENST00000511067 SMR3BP02814 79 aaPredicted RBP0.61□□□□□ -2.31
CHD1-206ENST00000511067 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
CHD1-206ENST00000511067 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
CHD1-206ENST00000511067 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
CHD1-206ENST00000511067 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
CHD1-206ENST00000511067 MT1XP80297 61 aa0.57□□□□□ -2.32
CHD1-206ENST00000511067 MT1BP07438 61 aa0.56□□□□□ -2.32
CHD1-206ENST00000511067 KRTAP19-5Q3LI72 72 aa0.56□□□□□ -2.32
CHD1-206ENST00000511067 KRTAP19-8Q3LI54 63 aa0.55□□□□□ -2.32
CHD1-206ENST00000511067 MT1FP04733 61 aa0.54□□□□□ -2.32
CHD1-206ENST00000511067 SSPOA2VEC9 5147 aa0.54□□□□□ -2.32
CHD1-206ENST00000511067 MT2AP02795 61 aa0.53□□□□□ -2.32
CHD1-206ENST00000511067 USH2AO75445 5202 aa0.52□□□□□ -2.33
CHD1-206ENST00000511067 KRTAP19-7Q3SYF9 63 aa0.52□□□□□ -2.33
CHD1-206ENST00000511067 KMT2DO14686 5537 aa0.51□□□□□ -2.33
CHD1-206ENST00000511067 M0R2T5 61 aa0.5□□□□□ -2.33
CHD1-206ENST00000511067 MT1HP80294 61 aa0.5□□□□□ -2.33
CHD1-206ENST00000511067 MT1LQ93083 61 aa0.5□□□□□ -2.33
CHD1-206ENST00000511067 PRM1P04553 51 aa0.48□□□□□ -2.33
CHD1-206ENST00000511067 MT1EP04732 61 aa0.48□□□□□ -2.33
CHD1-206ENST00000511067 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
CHD1-206ENST00000511067 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
CHD1-206ENST00000511067 MUC12Q9UKN1 5478 aa0.45□□□□□ -2.34
CHD1-206ENST00000511067 MT1AP04731 61 aa0.45□□□□□ -2.34
CHD1-206ENST00000511067 MT1GP13640 62 aa0.44□□□□□ -2.34
CHD1-206ENST00000511067 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
CHD1-206ENST00000511067 MT1MQ8N339 61 aa0.44□□□□□ -2.34
CHD1-206ENST00000511067 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
CHD1-206ENST00000511067 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
CHD1-206ENST00000511067 SPRR2AP35326 72 aa0.39□□□□□ -2.35
CHD1-206ENST00000511067 DSTQ03001 7570 aaKnown RBP0.38□□□□□ -2.35
CHD1-206ENST00000511067 SPRR2EP22531 72 aa0.38□□□□□ -2.35
CHD1-206ENST00000511067 SPRR2DP22532 72 aa0.38□□□□□ -2.35
CHD1-206ENST00000511067 SPRR2BP35325 72 aa0.37□□□□□ -2.35
CHD1-206ENST00000511067 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
CHD1-206ENST00000511067 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
CHD1-206ENST00000511067 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
CHD1-206ENST00000511067 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
CHD1-206ENST00000511067 NEBP20929 6669 aa0.29□□□□□ -2.36
CHD1-206ENST00000511067 KRTAP20-2Q3LI61 65 aa0.26□□□□□ -2.37
CHD1-206ENST00000511067 MT4P47944 62 aa0.21□□□□□ -2.38
CHD1-206ENST00000511067 KRTAP20-1Q3LI63 56 aa0.19□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms