RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 KRTAP9-2Q9BYQ4 174 aa4.07□□□□□ -1.76
SH3TC2-208ENST00000510779 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
SH3TC2-208ENST00000510779 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
SH3TC2-208ENST00000510779 MT1EP04732 61 aa4.03□□□□□ -1.76
SH3TC2-208ENST00000510779 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
SH3TC2-208ENST00000510779 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
SH3TC2-208ENST00000510779 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
SH3TC2-208ENST00000510779 MT1GP13640 62 aa4□□□□□ -1.77
SH3TC2-208ENST00000510779 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
SH3TC2-208ENST00000510779 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
SH3TC2-208ENST00000510779 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
SH3TC2-208ENST00000510779 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
SH3TC2-208ENST00000510779 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
SH3TC2-208ENST00000510779 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
SH3TC2-208ENST00000510779 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
SH3TC2-208ENST00000510779 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
SH3TC2-208ENST00000510779 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
SH3TC2-208ENST00000510779 MT1MQ8N339 61 aa3.76□□□□□ -1.81
SH3TC2-208ENST00000510779 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
SH3TC2-208ENST00000510779 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
SH3TC2-208ENST00000510779 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
SH3TC2-208ENST00000510779 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
SH3TC2-208ENST00000510779 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
SH3TC2-208ENST00000510779 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
SH3TC2-208ENST00000510779 PRM1P04553 51 aa3.6□□□□□ -1.83
SH3TC2-208ENST00000510779 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
SH3TC2-208ENST00000510779 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
SH3TC2-208ENST00000510779 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
SH3TC2-208ENST00000510779 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
SH3TC2-208ENST00000510779 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
SH3TC2-208ENST00000510779 MT1AP04731 61 aa3.47□□□□□ -1.85
SH3TC2-208ENST00000510779 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
SH3TC2-208ENST00000510779 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
SH3TC2-208ENST00000510779 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
SH3TC2-208ENST00000510779 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
SH3TC2-208ENST00000510779 SPRR2EP22531 72 aa3.38□□□□□ -1.87
SH3TC2-208ENST00000510779 SPRR2BP35325 72 aa3.38□□□□□ -1.87
SH3TC2-208ENST00000510779 SPRR2AP35326 72 aa3.38□□□□□ -1.87
SH3TC2-208ENST00000510779 NEBP20929 6669 aa3.38□□□□□ -1.87
SH3TC2-208ENST00000510779 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
SH3TC2-208ENST00000510779 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SH3TC2-208ENST00000510779 SPRR2DP22532 72 aa3.24□□□□□ -1.89
SH3TC2-208ENST00000510779 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
SH3TC2-208ENST00000510779 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
SH3TC2-208ENST00000510779 MT3P25713 68 aa3.08□□□□□ -1.92
SH3TC2-208ENST00000510779 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SH3TC2-208ENST00000510779 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
SH3TC2-208ENST00000510779 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
SH3TC2-208ENST00000510779 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SH3TC2-208ENST00000510779 MT4P47944 62 aa2.88□□□□□ -1.95
SH3TC2-208ENST00000510779 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SH3TC2-208ENST00000510779 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
SH3TC2-208ENST00000510779 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
SH3TC2-208ENST00000510779 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
SH3TC2-208ENST00000510779 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SH3TC2-208ENST00000510779 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
SH3TC2-208ENST00000510779 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
SH3TC2-208ENST00000510779 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SH3TC2-208ENST00000510779 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.98
SH3TC2-208ENST00000510779 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
SH3TC2-208ENST00000510779 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
SH3TC2-208ENST00000510779 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SH3TC2-208ENST00000510779 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
SH3TC2-208ENST00000510779 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
SH3TC2-208ENST00000510779 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
SH3TC2-208ENST00000510779 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SH3TC2-208ENST00000510779 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
SH3TC2-208ENST00000510779 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SH3TC2-208ENST00000510779 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SH3TC2-208ENST00000510779 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SH3TC2-208ENST00000510779 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
SH3TC2-208ENST00000510779 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
SH3TC2-208ENST00000510779 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
SH3TC2-208ENST00000510779 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
SH3TC2-208ENST00000510779 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
SH3TC2-208ENST00000510779 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SH3TC2-208ENST00000510779 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SH3TC2-208ENST00000510779 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms