RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-215	ENST00000510241	KRTAP4-3	Q9BYR4	195 aa		5.47	□□□□□ -1.53
APBB3-215	ENST00000510241	CRCT1	Q9UGL9	99 aa		5.45	□□□□□ -1.54
APBB3-215	ENST00000510241	SSPO	A2VEC9	5147 aa		5.45	□□□□□ -1.54
APBB3-215	ENST00000510241	MT1L	Q93083	61 aa		5.39	□□□□□ -1.55
APBB3-215	ENST00000510241	SYNE1	Q8NF91	8797 aa	Known RBP	5.39	□□□□□ -1.55
APBB3-215	ENST00000510241	MT1E	P04732	61 aa		5.33	□□□□□ -1.56
APBB3-215	ENST00000510241	MT1G	P13640	62 aa		5.3	□□□□□ -1.56
APBB3-215	ENST00000510241	OBSCN	Q5VST9	7968 aa		5.29	□□□□□ -1.56
APBB3-215	ENST00000510241	KRTAP12-4	P60329	112 aa		5.16	□□□□□ -1.58
APBB3-215	ENST00000510241	KRTAP4-9	Q9BYQ8	210 aa		5.13	□□□□□ -1.59
APBB3-215	ENST00000510241	LCE2D	Q5TA82	110 aa	Predicted RBP	5.1	□□□□□ -1.59
APBB3-215	ENST00000510241	SYNE2	Q8WXH0	6885 aa	Known RBP	5.08	□□□□□ -1.6
APBB3-215	ENST00000510241	LCE3B	Q5TA77	95 aa		5.02	□□□□□ -1.61
APBB3-215	ENST00000510241	MT1M	Q8N339	61 aa		4.98	□□□□□ -1.61
APBB3-215	ENST00000510241	KRTAP19-6	Q3LI70	58 aa		4.91	□□□□□ -1.62
APBB3-215	ENST00000510241	KRTAP19-3	Q7Z4W3	81 aa		4.89	□□□□□ -1.63
APBB3-215	ENST00000510241	MDN1	Q9NU22	5596 aa		4.85	□□□□□ -1.63
APBB3-215	ENST00000510241	KRTAP9-2	Q9BYQ4	174 aa		4.85	□□□□□ -1.63
APBB3-215	ENST00000510241	MACF1	Q9UPN3	7388 aa	Known RBP	4.85	□□□□□ -1.63
APBB3-215	ENST00000510241	SPRR2F	Q96RM1	72 aa		4.8	□□□□□ -1.64
APBB3-215	ENST00000510241	KRTAP19-4	Q3LI73	84 aa		4.77	□□□□□ -1.65
APBB3-215	ENST00000510241	KRTAP9-7	A8MTY7	169 aa		4.76	□□□□□ -1.65
APBB3-215	ENST00000510241	KRTAP6-1	Q3LI64	71 aa		4.71	□□□□□ -1.66
APBB3-215	ENST00000510241	LCE5A	Q5TCM9	118 aa		4.66	□□□□□ -1.66
APBB3-215	ENST00000510241	PRM1	P04553	51 aa		4.63	□□□□□ -1.67
APBB3-215	ENST00000510241	LCE3D	Q9BYE3	92 aa		4.59	□□□□□ -1.67
APBB3-215	ENST00000510241	KRTAP9-6	A0A140TA67	174 aa		4.58	□□□□□ -1.68
APBB3-215	ENST00000510241	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.57	□□□□□ -1.68
APBB3-215	ENST00000510241	LCE3E	Q5T5B0	92 aa		4.51	□□□□□ -1.69
APBB3-215	ENST00000510241	MT1A	P04731	61 aa		4.42	□□□□□ -1.7
APBB3-215	ENST00000510241	KRTAP6-2	Q3LI66	62 aa		4.36	□□□□□ -1.71
APBB3-215	ENST00000510241	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.33	□□□□□ -1.72
APBB3-215	ENST00000510241	KRTAP5-9	P26371	169 aa		4.3	□□□□□ -1.72
APBB3-215	ENST00000510241	LCE1A	Q5T7P2	110 aa		4.27	□□□□□ -1.73
APBB3-215	ENST00000510241	KRTAP6-3	Q3LI67	103 aa		4.2	□□□□□ -1.74
APBB3-215	ENST00000510241	SPRR2E	P22531	72 aa		4.19	□□□□□ -1.74
APBB3-215	ENST00000510241	SPRR2B	P35325	72 aa		4.19	□□□□□ -1.74
APBB3-215	ENST00000510241	SPRR2A	P35326	72 aa		4.19	□□□□□ -1.74
APBB3-215	ENST00000510241	KRTAP9-4	Q9BYQ2	154 aa		4.15	□□□□□ -1.75
APBB3-215	ENST00000510241	SPRR2D	P22532	72 aa		4.02	□□□□□ -1.77
APBB3-215	ENST00000510241	KRTAP2-2	Q9BYT5	123 aa		3.99	□□□□□ -1.77
APBB3-215	ENST00000510241	MT3	P25713	68 aa		3.94	□□□□□ -1.78
APBB3-215	ENST00000510241	NEB	P20929	6669 aa		3.92	□□□□□ -1.78
APBB3-215	ENST00000510241	KRTAP4-6	Q9BYQ5	205 aa		3.76	□□□□□ -1.81
APBB3-215	ENST00000510241	MT4	P47944	62 aa		3.75	□□□□□ -1.81
APBB3-215	ENST00000510241	LCE1E	Q5T753	118 aa		3.72	□□□□□ -1.81
APBB3-215	ENST00000510241	MUC5AC	P98088	5654 aa		3.65	□□□□□ -1.82
APBB3-215	ENST00000510241	KRTAP20-1	Q3LI63	56 aa		3.62	□□□□□ -1.83
APBB3-215	ENST00000510241	KRTAP5-4	Q6L8H1	288 aa		3.59	□□□□□ -1.83
APBB3-215	ENST00000510241	KRTAP4-11	Q9BYQ6	195 aa		3.58	□□□□□ -1.84
APBB3-215	ENST00000510241	LCE1D	Q5T752	114 aa		3.57	□□□□□ -1.84
APBB3-215	ENST00000510241	HMCN1	Q96RW7	5635 aa		3.55	□□□□□ -1.84
APBB3-215	ENST00000510241	LCE4A	Q5TA78	99 aa		3.51	□□□□□ -1.85
APBB3-215	ENST00000510241	LCE1B	Q5T7P3	118 aa		3.49	□□□□□ -1.85
APBB3-215	ENST00000510241	MUC19	Q7Z5P9	8384 aa		3.44	□□□□□ -1.86
APBB3-215	ENST00000510241	KRTAP20-2	Q3LI61	65 aa		3.43	□□□□□ -1.86
APBB3-215	ENST00000510241	KRTAP5-2	Q701N4	177 aa		3.29	□□□□□ -1.88
APBB3-215	ENST00000510241	KRTAP5-10	Q6L8G5	202 aa		3.28	□□□□□ -1.88
APBB3-215	ENST00000510241	KRTAP5-3	Q6L8H2	238 aa		3.25	□□□□□ -1.89
APBB3-215	ENST00000510241	KRTAP4-4	Q9BYR3	166 aa		3.09	□□□□□ -1.92
APBB3-215	ENST00000510241	LCE1F	Q5T754	118 aa		3.06	□□□□□ -1.92
APBB3-215	ENST00000510241	KRTAP5-1	Q6L8H4	278 aa		3.06	□□□□□ -1.92
APBB3-215	ENST00000510241	KRTAP4-2	Q9BYR5	136 aa		3.04	□□□□□ -1.92
APBB3-215	ENST00000510241	GPR98	Q8WXG9	6306 aa		3	□□□□□ -1.93
APBB3-215	ENST00000510241	AHNAK2	Q8IVF2	5795 aa		2.96	□□□□□ -1.93
APBB3-215	ENST00000510241	KRTAP21-2	Q3LI59	83 aa		2.93	□□□□□ -1.94
APBB3-215	ENST00000510241	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.9	□□□□□ -1.95
APBB3-215	ENST00000510241	LCE1C	Q5T751	118 aa		2.87	□□□□□ -1.95
APBB3-215	ENST00000510241	KRTAP9-9	Q9BYP9	154 aa		2.83	□□□□□ -1.96
APBB3-215	ENST00000510241	KRTAP5-8	O75690	187 aa		2.82	□□□□□ -1.96
APBB3-215	ENST00000510241	KRTAP4-12	Q9BQ66	201 aa		2.77	□□□□□ -1.97
APBB3-215	ENST00000510241	KRTAP21-1	Q3LI58	79 aa		2.73	□□□□□ -1.97
APBB3-215	ENST00000510241	KRTAP5-7	Q6L8G8	165 aa		2.7	□□□□□ -1.98
APBB3-215	ENST00000510241	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.61	□□□□□ -1.99
APBB3-215	ENST00000510241	KRTAP5-11	Q6L8G4	156 aa		2.4	□□□□□ -2.03
APBB3-215	ENST00000510241	AHNAK	Q09666	5890 aa	Known RBP	2.36	□□□□□ -2.03
APBB3-215	ENST00000510241	PHGR1	C9JFL3	82 aa		2.15	□□□□□ -2.06
APBB3-215	ENST00000510241	MUC16	Q8WXI7	14507 aa		1.54	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 192.9 ms