RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
SEC31A-228ENST00000509142 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
SEC31A-228ENST00000509142 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
SEC31A-228ENST00000509142 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SEC31A-228ENST00000509142 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
SEC31A-228ENST00000509142 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
SEC31A-228ENST00000509142 MT1GP13640 62 aa3.61□□□□□ -1.83
SEC31A-228ENST00000509142 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
SEC31A-228ENST00000509142 MT1MQ8N339 61 aa3.59□□□□□ -1.84
SEC31A-228ENST00000509142 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
SEC31A-228ENST00000509142 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
SEC31A-228ENST00000509142 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
SEC31A-228ENST00000509142 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
SEC31A-228ENST00000509142 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
SEC31A-228ENST00000509142 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
SEC31A-228ENST00000509142 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
SEC31A-228ENST00000509142 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
SEC31A-228ENST00000509142 SPRR2EP22531 72 aa3.3□□□□□ -1.88
SEC31A-228ENST00000509142 SPRR2BP35325 72 aa3.3□□□□□ -1.88
SEC31A-228ENST00000509142 SPRR2AP35326 72 aa3.3□□□□□ -1.88
SEC31A-228ENST00000509142 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SEC31A-228ENST00000509142 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SEC31A-228ENST00000509142 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
SEC31A-228ENST00000509142 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
SEC31A-228ENST00000509142 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
SEC31A-228ENST00000509142 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
SEC31A-228ENST00000509142 MT1AP04731 61 aa3.21□□□□□ -1.9
SEC31A-228ENST00000509142 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SEC31A-228ENST00000509142 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
SEC31A-228ENST00000509142 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
SEC31A-228ENST00000509142 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
SEC31A-228ENST00000509142 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
SEC31A-228ENST00000509142 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
SEC31A-228ENST00000509142 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
SEC31A-228ENST00000509142 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
SEC31A-228ENST00000509142 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
SEC31A-228ENST00000509142 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
SEC31A-228ENST00000509142 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
SEC31A-228ENST00000509142 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
SEC31A-228ENST00000509142 MT3P25713 68 aa2.93□□□□□ -1.94
SEC31A-228ENST00000509142 PRM1P04553 51 aa2.92□□□□□ -1.94
SEC31A-228ENST00000509142 NEBP20929 6669 aa2.88□□□□□ -1.95
SEC31A-228ENST00000509142 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
SEC31A-228ENST00000509142 MT4P47944 62 aa2.79□□□□□ -1.96
SEC31A-228ENST00000509142 LCE4AQ5TA78 99 aa2.71□□□□□ -1.97
SEC31A-228ENST00000509142 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
SEC31A-228ENST00000509142 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
SEC31A-228ENST00000509142 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
SEC31A-228ENST00000509142 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
SEC31A-228ENST00000509142 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
SEC31A-228ENST00000509142 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
SEC31A-228ENST00000509142 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SEC31A-228ENST00000509142 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
SEC31A-228ENST00000509142 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
SEC31A-228ENST00000509142 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
SEC31A-228ENST00000509142 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SEC31A-228ENST00000509142 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SEC31A-228ENST00000509142 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
SEC31A-228ENST00000509142 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
SEC31A-228ENST00000509142 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
SEC31A-228ENST00000509142 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SEC31A-228ENST00000509142 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SEC31A-228ENST00000509142 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SEC31A-228ENST00000509142 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
SEC31A-228ENST00000509142 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SEC31A-228ENST00000509142 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
SEC31A-228ENST00000509142 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
SEC31A-228ENST00000509142 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SEC31A-228ENST00000509142 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
SEC31A-228ENST00000509142 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
SEC31A-228ENST00000509142 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
SEC31A-228ENST00000509142 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
SEC31A-228ENST00000509142 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SEC31A-228ENST00000509142 LCE1FQ5T754 118 aa1.7□□□□□ -2.14
SEC31A-228ENST00000509142 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SEC31A-228ENST00000509142 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
SEC31A-228ENST00000509142 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms