RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, human

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FRAS1-204	ENST00000508909	KRTAP19-6	Q3LI70	58 aa		5.34	□□□□□ -1.56
FRAS1-204	ENST00000508909	FSIP2	Q5CZC0	6907 aa		5.32	□□□□□ -1.56
FRAS1-204	ENST00000508909	KRTAP4-3	Q9BYR4	195 aa		5.27	□□□□□ -1.57
FRAS1-204	ENST00000508909	LOC100996750	A0A140TA64	210 aa		5.26	□□□□□ -1.57
FRAS1-204	ENST00000508909	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.21	□□□□□ -1.57
FRAS1-204	ENST00000508909	MUC12	Q9UKN1	5478 aa		5.17	□□□□□ -1.58
FRAS1-204	ENST00000508909	MT1G	P13640	62 aa		5.17	□□□□□ -1.58
FRAS1-204	ENST00000508909	MT1M	Q8N339	61 aa		5.14	□□□□□ -1.59
FRAS1-204	ENST00000508909	KRTAP19-3	Q7Z4W3	81 aa		5.12	□□□□□ -1.59
FRAS1-204	ENST00000508909	CRCT1	Q9UGL9	99 aa		5.02	□□□□□ -1.61
FRAS1-204	ENST00000508909	DST	Q03001	7570 aa	Known RBP	4.96	□□□□□ -1.62
FRAS1-204	ENST00000508909	LCE5A	Q5TCM9	118 aa		4.95	□□□□□ -1.62
FRAS1-204	ENST00000508909	KRTAP12-4	P60329	112 aa		4.88	□□□□□ -1.63
FRAS1-204	ENST00000508909	SPRR2F	Q96RM1	72 aa		4.88	□□□□□ -1.63
FRAS1-204	ENST00000508909	MACF1	Q9UPN3	7388 aa	Known RBP	4.79	□□□□□ -1.64
FRAS1-204	ENST00000508909	KRTAP4-6	Q9BYQ5	205 aa		4.79	□□□□□ -1.64
FRAS1-204	ENST00000508909	LCE3B	Q5TA77	95 aa		4.77	□□□□□ -1.65
FRAS1-204	ENST00000508909	KRTAP4-9	Q9BYQ8	210 aa		4.75	□□□□□ -1.65
FRAS1-204	ENST00000508909	KRTAP6-1	Q3LI64	71 aa		4.71	□□□□□ -1.66
FRAS1-204	ENST00000508909	SYNE1	Q8NF91	8797 aa	Known RBP	4.68	□□□□□ -1.66
FRAS1-204	ENST00000508909	SYNE2	Q8WXH0	6885 aa	Known RBP	4.66	□□□□□ -1.66
FRAS1-204	ENST00000508909	MDN1	Q9NU22	5596 aa		4.65	□□□□□ -1.66
FRAS1-204	ENST00000508909	MT1A	P04731	61 aa		4.65	□□□□□ -1.66
FRAS1-204	ENST00000508909	LCE1A	Q5T7P2	110 aa		4.57	□□□□□ -1.68
FRAS1-204	ENST00000508909	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.56	□□□□□ -1.68
FRAS1-204	ENST00000508909	KRTAP9-2	Q9BYQ4	174 aa		4.52	□□□□□ -1.69
FRAS1-204	ENST00000508909	LCE3D	Q9BYE3	92 aa		4.52	□□□□□ -1.69
FRAS1-204	ENST00000508909	KRTAP5-9	P26371	169 aa		4.51	□□□□□ -1.69
FRAS1-204	ENST00000508909	LCE3E	Q5T5B0	92 aa		4.46	□□□□□ -1.7
FRAS1-204	ENST00000508909	KRTAP9-7	A8MTY7	169 aa		4.41	□□□□□ -1.7
FRAS1-204	ENST00000508909	SPRR2E	P22531	72 aa		4.39	□□□□□ -1.71
FRAS1-204	ENST00000508909	SPRR2B	P35325	72 aa		4.39	□□□□□ -1.71
FRAS1-204	ENST00000508909	SPRR2A	P35326	72 aa		4.39	□□□□□ -1.71
FRAS1-204	ENST00000508909	KRTAP9-4	Q9BYQ2	154 aa		4.35	□□□□□ -1.71
FRAS1-204	ENST00000508909	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.33	□□□□□ -1.72
FRAS1-204	ENST00000508909	PRM1	P04553	51 aa		4.32	□□□□□ -1.72
FRAS1-204	ENST00000508909	KRTAP9-6	A0A140TA67	174 aa		4.3	□□□□□ -1.72
FRAS1-204	ENST00000508909	SPRR2D	P22532	72 aa		4.2	□□□□□ -1.74
FRAS1-204	ENST00000508909	KRTAP6-2	Q3LI66	62 aa		4.2	□□□□□ -1.74
FRAS1-204	ENST00000508909	KRTAP4-12	Q9BQ66	201 aa		4.19	□□□□□ -1.74
FRAS1-204	ENST00000508909	OBSCN	Q5VST9	7968 aa		4.14	□□□□□ -1.75
FRAS1-204	ENST00000508909	MT3	P25713	68 aa		4.12	□□□□□ -1.75
FRAS1-204	ENST00000508909	KRTAP9-9	Q9BYP9	154 aa		4.11	□□□□□ -1.75
FRAS1-204	ENST00000508909	KRTAP6-3	Q3LI67	103 aa		4.07	□□□□□ -1.76
FRAS1-204	ENST00000508909	KRTAP5-4	Q6L8H1	288 aa		3.95	□□□□□ -1.78
FRAS1-204	ENST00000508909	LCE4A	Q5TA78	99 aa		3.95	□□□□□ -1.78
FRAS1-204	ENST00000508909	LCE1D	Q5T752	114 aa		3.9	□□□□□ -1.79
FRAS1-204	ENST00000508909	KRTAP2-2	Q9BYT5	123 aa		3.81	□□□□□ -1.8
FRAS1-204	ENST00000508909	NEB	P20929	6669 aa		3.79	□□□□□ -1.8
FRAS1-204	ENST00000508909	KRTAP4-2	Q9BYR5	136 aa		3.74	□□□□□ -1.81
FRAS1-204	ENST00000508909	MT4	P47944	62 aa		3.73	□□□□□ -1.81
FRAS1-204	ENST00000508909	KRTAP5-2	Q701N4	177 aa		3.72	□□□□□ -1.81
FRAS1-204	ENST00000508909	KRTAP20-2	Q3LI61	65 aa		3.7	□□□□□ -1.82
FRAS1-204	ENST00000508909	KRTAP4-11	Q9BYQ6	195 aa		3.65	□□□□□ -1.82
FRAS1-204	ENST00000508909	HMCN1	Q96RW7	5635 aa		3.59	□□□□□ -1.83
FRAS1-204	ENST00000508909	KRTAP5-3	Q6L8H2	238 aa		3.54	□□□□□ -1.84
FRAS1-204	ENST00000508909	MUC5AC	P98088	5654 aa		3.54	□□□□□ -1.84
FRAS1-204	ENST00000508909	KRTAP20-1	Q3LI63	56 aa		3.43	□□□□□ -1.86
FRAS1-204	ENST00000508909	LCE1E	Q5T753	118 aa		3.35	□□□□□ -1.87
FRAS1-204	ENST00000508909	LCE1B	Q5T7P3	118 aa		3.33	□□□□□ -1.88
FRAS1-204	ENST00000508909	KRTAP5-10	Q6L8G5	202 aa		3.33	□□□□□ -1.88
FRAS1-204	ENST00000508909	KRTAP5-1	Q6L8H4	278 aa		3.28	□□□□□ -1.88
FRAS1-204	ENST00000508909	LCE1C	Q5T751	118 aa		3.18	□□□□□ -1.9
FRAS1-204	ENST00000508909	KRTAP21-2	Q3LI59	83 aa		3.05	□□□□□ -1.92
FRAS1-204	ENST00000508909	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.02	□□□□□ -1.93
FRAS1-204	ENST00000508909	KRTAP5-8	O75690	187 aa		2.91	□□□□□ -1.94
FRAS1-204	ENST00000508909	KRTAP5-7	Q6L8G8	165 aa		2.87	□□□□□ -1.95
FRAS1-204	ENST00000508909	LCE1F	Q5T754	118 aa		2.82	□□□□□ -1.96
FRAS1-204	ENST00000508909	KRTAP4-4	Q9BYR3	166 aa		2.79	□□□□□ -1.96
FRAS1-204	ENST00000508909	AHNAK2	Q8IVF2	5795 aa		2.78	□□□□□ -1.96
FRAS1-204	ENST00000508909	KRTAP21-1	Q3LI58	79 aa		2.73	□□□□□ -1.97
FRAS1-204	ENST00000508909	KRTAP5-11	Q6L8G4	156 aa		2.71	□□□□□ -1.98
FRAS1-204	ENST00000508909	MUC19	Q7Z5P9	8384 aa		2.67	□□□□□ -1.98
FRAS1-204	ENST00000508909	GPR98	Q8WXG9	6306 aa		2.67	□□□□□ -1.98
FRAS1-204	ENST00000508909	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.64	□□□□□ -1.99
FRAS1-204	ENST00000508909	PHGR1	C9JFL3	82 aa		2.36	□□□□□ -2.03
FRAS1-204	ENST00000508909	AHNAK	Q09666	5890 aa	Known RBP	2.2	□□□□□ -2.06
FRAS1-204	ENST00000508909	MUC16	Q8WXI7	14507 aa		1.56	□□□□□ -2.16

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