RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
ATP2C1-214ENST00000508532 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
ATP2C1-214ENST00000508532 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
ATP2C1-214ENST00000508532 SPRR2EP22531 72 aa4.82□□□□□ -1.64
ATP2C1-214ENST00000508532 SPRR2BP35325 72 aa4.82□□□□□ -1.64
ATP2C1-214ENST00000508532 SPRR2AP35326 72 aa4.82□□□□□ -1.64
ATP2C1-214ENST00000508532 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
ATP2C1-214ENST00000508532 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
ATP2C1-214ENST00000508532 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
ATP2C1-214ENST00000508532 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
ATP2C1-214ENST00000508532 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
ATP2C1-214ENST00000508532 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
ATP2C1-214ENST00000508532 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
ATP2C1-214ENST00000508532 SPRR2DP22532 72 aa4.7□□□□□ -1.66
ATP2C1-214ENST00000508532 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
ATP2C1-214ENST00000508532 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
ATP2C1-214ENST00000508532 MT1MQ8N339 61 aa4.56□□□□□ -1.68
ATP2C1-214ENST00000508532 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
ATP2C1-214ENST00000508532 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
ATP2C1-214ENST00000508532 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
ATP2C1-214ENST00000508532 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
ATP2C1-214ENST00000508532 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
ATP2C1-214ENST00000508532 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
ATP2C1-214ENST00000508532 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
ATP2C1-214ENST00000508532 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
ATP2C1-214ENST00000508532 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
ATP2C1-214ENST00000508532 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
ATP2C1-214ENST00000508532 PRM1P04553 51 aa4.32□□□□□ -1.72
ATP2C1-214ENST00000508532 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
ATP2C1-214ENST00000508532 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
ATP2C1-214ENST00000508532 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
ATP2C1-214ENST00000508532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
ATP2C1-214ENST00000508532 MT1AP04731 61 aa4.12□□□□□ -1.75
ATP2C1-214ENST00000508532 MT4P47944 62 aa4.12□□□□□ -1.75
ATP2C1-214ENST00000508532 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
ATP2C1-214ENST00000508532 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
ATP2C1-214ENST00000508532 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
ATP2C1-214ENST00000508532 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
ATP2C1-214ENST00000508532 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
ATP2C1-214ENST00000508532 MT3P25713 68 aa3.92□□□□□ -1.78
ATP2C1-214ENST00000508532 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
ATP2C1-214ENST00000508532 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
ATP2C1-214ENST00000508532 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-214ENST00000508532 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
ATP2C1-214ENST00000508532 NEBP20929 6669 aa3.67□□□□□ -1.82
ATP2C1-214ENST00000508532 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
ATP2C1-214ENST00000508532 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
ATP2C1-214ENST00000508532 LCE1DQ5T752 114 aa3.65□□□□□ -1.82
ATP2C1-214ENST00000508532 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
ATP2C1-214ENST00000508532 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
ATP2C1-214ENST00000508532 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ATP2C1-214ENST00000508532 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
ATP2C1-214ENST00000508532 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
ATP2C1-214ENST00000508532 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.89
ATP2C1-214ENST00000508532 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
ATP2C1-214ENST00000508532 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
ATP2C1-214ENST00000508532 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
ATP2C1-214ENST00000508532 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
ATP2C1-214ENST00000508532 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
ATP2C1-214ENST00000508532 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
ATP2C1-214ENST00000508532 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
ATP2C1-214ENST00000508532 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
ATP2C1-214ENST00000508532 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
ATP2C1-214ENST00000508532 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
ATP2C1-214ENST00000508532 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
ATP2C1-214ENST00000508532 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
ATP2C1-214ENST00000508532 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
ATP2C1-214ENST00000508532 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
ATP2C1-214ENST00000508532 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
ATP2C1-214ENST00000508532 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
ATP2C1-214ENST00000508532 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
ATP2C1-214ENST00000508532 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
ATP2C1-214ENST00000508532 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
ATP2C1-214ENST00000508532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
ATP2C1-214ENST00000508532 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
ATP2C1-214ENST00000508532 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
ATP2C1-214ENST00000508532 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms