RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 SMIM20Q8N5G0 67 aa5.33□□□□□ -1.56
SNF8-205ENST00000507302 TNP1P09430 55 aa5.28□□□□□ -1.56
SNF8-205ENST00000507302 A0A1B0GU33 70 aa5.27□□□□□ -1.57
SNF8-205ENST00000507302 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
SNF8-205ENST00000507302 SNURFQ9Y675 71 aa5.27□□□□□ -1.57
SNF8-205ENST00000507302 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
SNF8-205ENST00000507302 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
SNF8-205ENST00000507302 SEC61GP60059 68 aa5.24□□□□□ -1.57
SNF8-205ENST00000507302 ANAPC13Q9BS18 74 aa5.21□□□□□ -1.58
SNF8-205ENST00000507302 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
SNF8-205ENST00000507302 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
SNF8-205ENST00000507302 COA5Q86WW8 74 aa5.19□□□□□ -1.58
SNF8-205ENST00000507302 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SNF8-205ENST00000507302 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
SNF8-205ENST00000507302 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
SNF8-205ENST00000507302 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
SNF8-205ENST00000507302 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
SNF8-205ENST00000507302 CCDC179H3BU77 68 aa5.09□□□□□ -1.59
SNF8-205ENST00000507302 A8MU10 97 aa5.08□□□□□ -1.6
SNF8-205ENST00000507302 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
SNF8-205ENST00000507302 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SNF8-205ENST00000507302 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
SNF8-205ENST00000507302 COX7CP15954 63 aa4.96□□□□□ -1.62
SNF8-205ENST00000507302 TMEM258P61165 79 aa4.94□□□□□ -1.62
SNF8-205ENST00000507302 MT1AP04731 61 aa4.93□□□□□ -1.62
SNF8-205ENST00000507302 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
SNF8-205ENST00000507302 A0A1B0GU69 56 aa4.9□□□□□ -1.63
SNF8-205ENST00000507302 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
SNF8-205ENST00000507302 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
SNF8-205ENST00000507302 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
SNF8-205ENST00000507302 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
SNF8-205ENST00000507302 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
SNF8-205ENST00000507302 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
SNF8-205ENST00000507302 H7BZZ5 65 aa4.75□□□□□ -1.65
SNF8-205ENST00000507302 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
SNF8-205ENST00000507302 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
SNF8-205ENST00000507302 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
SNF8-205ENST00000507302 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
SNF8-205ENST00000507302 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
SNF8-205ENST00000507302 V9GYY9 64 aa4.62□□□□□ -1.67
SNF8-205ENST00000507302 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
SNF8-205ENST00000507302 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
SNF8-205ENST00000507302 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
SNF8-205ENST00000507302 Q1T7F1 81 aa4.53□□□□□ -1.68
SNF8-205ENST00000507302 MT3P25713 68 aa4.51□□□□□ -1.69
SNF8-205ENST00000507302 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
SNF8-205ENST00000507302 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
SNF8-205ENST00000507302 UQCR11O14957 56 aa4.46□□□□□ -1.7
SNF8-205ENST00000507302 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
SNF8-205ENST00000507302 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
SNF8-205ENST00000507302 PSPHP1O15172 72 aa4.31□□□□□ -1.72
SNF8-205ENST00000507302 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
SNF8-205ENST00000507302 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
SNF8-205ENST00000507302 K7ERS5 55 aa4.26□□□□□ -1.73
SNF8-205ENST00000507302 A6NED7 52 aa4.2□□□□□ -1.74
SNF8-205ENST00000507302 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SNF8-205ENST00000507302 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
SNF8-205ENST00000507302 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
SNF8-205ENST00000507302 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
SNF8-205ENST00000507302 H3BS24 57 aa3.95□□□□□ -1.78
SNF8-205ENST00000507302 ROMO1P60602 79 aa3.92□□□□□ -1.78
SNF8-205ENST00000507302 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
SNF8-205ENST00000507302 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SNF8-205ENST00000507302 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SNF8-205ENST00000507302 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
SNF8-205ENST00000507302 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
SNF8-205ENST00000507302 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SNF8-205ENST00000507302 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
SNF8-205ENST00000507302 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SNF8-205ENST00000507302 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SNF8-205ENST00000507302 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
SNF8-205ENST00000507302 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SNF8-205ENST00000507302 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SNF8-205ENST00000507302 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SNF8-205ENST00000507302 INE1O15225 51 aa2.95□□□□□ -1.94
SNF8-205ENST00000507302 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SNF8-205ENST00000507302 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
SNF8-205ENST00000507302 PRM1P04553 51 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 440.8 ms