RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 MT1HL1P0DM35 61 aa1.91□□□□□ -2.1
CALCOCO2-208ENST00000506971 FAT4Q6V0I7 4981 aa1.9□□□□□ -2.11
CALCOCO2-208ENST00000506971 HSPG2P98160 4391 aa1.89□□□□□ -2.11
CALCOCO2-208ENST00000506971 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
CALCOCO2-208ENST00000506971 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
CALCOCO2-208ENST00000506971 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
CALCOCO2-208ENST00000506971 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
CALCOCO2-208ENST00000506971 DMBT1Q9UGM3 2413 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-208ENST00000506971 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
CALCOCO2-208ENST00000506971 A0A0D9SG42 100 aa1.84□□□□□ -2.11
CALCOCO2-208ENST00000506971 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
CALCOCO2-208ENST00000506971 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
CALCOCO2-208ENST00000506971 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
CALCOCO2-208ENST00000506971 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
CALCOCO2-208ENST00000506971 MYCBP2O75592 4640 aa1.79□□□□□ -2.12
CALCOCO2-208ENST00000506971 NEBP20929 6669 aa1.76□□□□□ -2.13
CALCOCO2-208ENST00000506971 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
CALCOCO2-208ENST00000506971 LRP2P98164 4655 aa1.76□□□□□ -2.13
CALCOCO2-208ENST00000506971 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
CALCOCO2-208ENST00000506971 KRTAP19-2Q3LHN2 52 aa1.73□□□□□ -2.13
CALCOCO2-208ENST00000506971 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
CALCOCO2-208ENST00000506971 TNP1P09430 55 aa1.72□□□□□ -2.13
CALCOCO2-208ENST00000506971 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
CALCOCO2-208ENST00000506971 LPAP08519 4548 aa1.72□□□□□ -2.13
CALCOCO2-208ENST00000506971 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
CALCOCO2-208ENST00000506971 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
CALCOCO2-208ENST00000506971 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
CALCOCO2-208ENST00000506971 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
CALCOCO2-208ENST00000506971 SPRR2GQ9BYE4 73 aa1.68□□□□□ -2.14
CALCOCO2-208ENST00000506971 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
CALCOCO2-208ENST00000506971 M0R2T5 61 aa1.63□□□□□ -2.15
CALCOCO2-208ENST00000506971 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
CALCOCO2-208ENST00000506971 MT1HP80294 61 aa1.6□□□□□ -2.15
CALCOCO2-208ENST00000506971 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
CALCOCO2-208ENST00000506971 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
CALCOCO2-208ENST00000506971 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
CALCOCO2-208ENST00000506971 MT2AP02795 61 aa1.57□□□□□ -2.16
CALCOCO2-208ENST00000506971 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
CALCOCO2-208ENST00000506971 MT1FP04733 61 aa1.55□□□□□ -2.16
CALCOCO2-208ENST00000506971 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
CALCOCO2-208ENST00000506971 MT1BP07438 61 aa1.51□□□□□ -2.17
CALCOCO2-208ENST00000506971 KMT2DO14686 5537 aa1.5□□□□□ -2.17
CALCOCO2-208ENST00000506971 MT1XP80297 61 aa1.5□□□□□ -2.17
CALCOCO2-208ENST00000506971 USH2AO75445 5202 aa1.47□□□□□ -2.17
CALCOCO2-208ENST00000506971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
CALCOCO2-208ENST00000506971 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
CALCOCO2-208ENST00000506971 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
CALCOCO2-208ENST00000506971 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
CALCOCO2-208ENST00000506971 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
CALCOCO2-208ENST00000506971 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
CALCOCO2-208ENST00000506971 KRTAP2-3P0C7H8 128 aa1.36□□□□□ -2.19
CALCOCO2-208ENST00000506971 KRTAP2-4Q9BYR9 128 aa1.36□□□□□ -2.19
CALCOCO2-208ENST00000506971 KRTAP19-6Q3LI70 58 aa1.35□□□□□ -2.19
CALCOCO2-208ENST00000506971 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
CALCOCO2-208ENST00000506971 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
CALCOCO2-208ENST00000506971 MT1EP04732 61 aa1.32□□□□□ -2.2
CALCOCO2-208ENST00000506971 MT1LQ93083 61 aa1.31□□□□□ -2.2
CALCOCO2-208ENST00000506971 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
CALCOCO2-208ENST00000506971 MT1GP13640 62 aa1.29□□□□□ -2.2
CALCOCO2-208ENST00000506971 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
CALCOCO2-208ENST00000506971 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
CALCOCO2-208ENST00000506971 MT1MQ8N339 61 aa1.24□□□□□ -2.21
CALCOCO2-208ENST00000506971 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
CALCOCO2-208ENST00000506971 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
CALCOCO2-208ENST00000506971 MT1AP04731 61 aa1.16□□□□□ -2.22
CALCOCO2-208ENST00000506971 SPRR2EP22531 72 aa1.08□□□□□ -2.24
CALCOCO2-208ENST00000506971 SPRR2BP35325 72 aa1.08□□□□□ -2.24
CALCOCO2-208ENST00000506971 SPRR2AP35326 72 aa1.08□□□□□ -2.24
CALCOCO2-208ENST00000506971 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
CALCOCO2-208ENST00000506971 SPRR2DP22532 72 aa1.05□□□□□ -2.24
CALCOCO2-208ENST00000506971 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
CALCOCO2-208ENST00000506971 PRM1P04553 51 aa0.98□□□□□ -2.25
CALCOCO2-208ENST00000506971 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
CALCOCO2-208ENST00000506971 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
CALCOCO2-208ENST00000506971 MT4P47944 62 aa0.92□□□□□ -2.26
CALCOCO2-208ENST00000506971 KRTAP20-2Q3LI61 65 aa0.91□□□□□ -2.26
CALCOCO2-208ENST00000506971 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
CALCOCO2-208ENST00000506971 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 150.3 ms