RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
PHF3-208ENST00000506783 KRTAP9-2Q9BYQ4 174 aa3.47□□□□□ -1.85
PHF3-208ENST00000506783 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
PHF3-208ENST00000506783 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
PHF3-208ENST00000506783 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
PHF3-208ENST00000506783 MT1GP13640 62 aa3.35□□□□□ -1.87
PHF3-208ENST00000506783 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
PHF3-208ENST00000506783 INE1O15225 51 aa3.33□□□□□ -1.88
PHF3-208ENST00000506783 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
PHF3-208ENST00000506783 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
PHF3-208ENST00000506783 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
PHF3-208ENST00000506783 MT1LQ93083 61 aa3.22□□□□□ -1.89
PHF3-208ENST00000506783 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
PHF3-208ENST00000506783 MT1EP04732 61 aa3.2□□□□□ -1.9
PHF3-208ENST00000506783 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
PHF3-208ENST00000506783 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
PHF3-208ENST00000506783 SPRR2EP22531 72 aa3.17□□□□□ -1.9
PHF3-208ENST00000506783 SPRR2BP35325 72 aa3.17□□□□□ -1.9
PHF3-208ENST00000506783 SPRR2AP35326 72 aa3.17□□□□□ -1.9
PHF3-208ENST00000506783 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
PHF3-208ENST00000506783 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
PHF3-208ENST00000506783 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
PHF3-208ENST00000506783 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
PHF3-208ENST00000506783 SPRR2DP22532 72 aa3.03□□□□□ -1.92
PHF3-208ENST00000506783 MT1MQ8N339 61 aa3.03□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
PHF3-208ENST00000506783 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
PHF3-208ENST00000506783 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
PHF3-208ENST00000506783 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
PHF3-208ENST00000506783 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.96
PHF3-208ENST00000506783 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
PHF3-208ENST00000506783 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
PHF3-208ENST00000506783 MT4P47944 62 aa2.82□□□□□ -1.96
PHF3-208ENST00000506783 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
PHF3-208ENST00000506783 PRM1P04553 51 aa2.78□□□□□ -1.96
PHF3-208ENST00000506783 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PHF3-208ENST00000506783 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
PHF3-208ENST00000506783 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
PHF3-208ENST00000506783 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
PHF3-208ENST00000506783 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
PHF3-208ENST00000506783 NEBP20929 6669 aa2.71□□□□□ -1.97
PHF3-208ENST00000506783 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
PHF3-208ENST00000506783 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
PHF3-208ENST00000506783 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
PHF3-208ENST00000506783 MT1AP04731 61 aa2.62□□□□□ -1.99
PHF3-208ENST00000506783 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
PHF3-208ENST00000506783 MT3P25713 68 aa2.5□□□□□ -2.01
PHF3-208ENST00000506783 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
PHF3-208ENST00000506783 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
PHF3-208ENST00000506783 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
PHF3-208ENST00000506783 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
PHF3-208ENST00000506783 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
PHF3-208ENST00000506783 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
PHF3-208ENST00000506783 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
PHF3-208ENST00000506783 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
PHF3-208ENST00000506783 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
PHF3-208ENST00000506783 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
PHF3-208ENST00000506783 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
PHF3-208ENST00000506783 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
PHF3-208ENST00000506783 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PHF3-208ENST00000506783 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
PHF3-208ENST00000506783 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
PHF3-208ENST00000506783 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.09
PHF3-208ENST00000506783 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
PHF3-208ENST00000506783 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
PHF3-208ENST00000506783 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
PHF3-208ENST00000506783 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PHF3-208ENST00000506783 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
PHF3-208ENST00000506783 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
PHF3-208ENST00000506783 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
PHF3-208ENST00000506783 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
PHF3-208ENST00000506783 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
PHF3-208ENST00000506783 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
PHF3-208ENST00000506783 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 130.9 ms