RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
POLR2J3-211ENST00000506060 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
POLR2J3-211ENST00000506060 MT1GP13640 62 aa4.21□□□□□ -1.74
POLR2J3-211ENST00000506060 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
POLR2J3-211ENST00000506060 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
POLR2J3-211ENST00000506060 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
POLR2J3-211ENST00000506060 SPRR2EP22531 72 aa4.12□□□□□ -1.75
POLR2J3-211ENST00000506060 SPRR2BP35325 72 aa4.12□□□□□ -1.75
POLR2J3-211ENST00000506060 SPRR2AP35326 72 aa4.12□□□□□ -1.75
POLR2J3-211ENST00000506060 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
POLR2J3-211ENST00000506060 MT1MQ8N339 61 aa4.11□□□□□ -1.75
POLR2J3-211ENST00000506060 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
POLR2J3-211ENST00000506060 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
POLR2J3-211ENST00000506060 SPRR2DP22532 72 aa3.98□□□□□ -1.77
POLR2J3-211ENST00000506060 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
POLR2J3-211ENST00000506060 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
POLR2J3-211ENST00000506060 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
POLR2J3-211ENST00000506060 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
POLR2J3-211ENST00000506060 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
POLR2J3-211ENST00000506060 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
POLR2J3-211ENST00000506060 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
POLR2J3-211ENST00000506060 NEBP20929 6669 aa3.78□□□□□ -1.8
POLR2J3-211ENST00000506060 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
POLR2J3-211ENST00000506060 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
POLR2J3-211ENST00000506060 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
POLR2J3-211ENST00000506060 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
POLR2J3-211ENST00000506060 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
POLR2J3-211ENST00000506060 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
POLR2J3-211ENST00000506060 MT1AP04731 61 aa3.67□□□□□ -1.82
POLR2J3-211ENST00000506060 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
POLR2J3-211ENST00000506060 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
POLR2J3-211ENST00000506060 H3BS24 57 aa3.62□□□□□ -1.83
POLR2J3-211ENST00000506060 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
POLR2J3-211ENST00000506060 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
POLR2J3-211ENST00000506060 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
POLR2J3-211ENST00000506060 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
POLR2J3-211ENST00000506060 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
POLR2J3-211ENST00000506060 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
POLR2J3-211ENST00000506060 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
POLR2J3-211ENST00000506060 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
POLR2J3-211ENST00000506060 MT4P47944 62 aa3.41□□□□□ -1.86
POLR2J3-211ENST00000506060 INE1O15225 51 aa3.36□□□□□ -1.87
POLR2J3-211ENST00000506060 MT3P25713 68 aa3.35□□□□□ -1.87
POLR2J3-211ENST00000506060 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
POLR2J3-211ENST00000506060 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
POLR2J3-211ENST00000506060 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
POLR2J3-211ENST00000506060 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
POLR2J3-211ENST00000506060 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
POLR2J3-211ENST00000506060 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
POLR2J3-211ENST00000506060 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
POLR2J3-211ENST00000506060 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
POLR2J3-211ENST00000506060 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
POLR2J3-211ENST00000506060 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
POLR2J3-211ENST00000506060 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
POLR2J3-211ENST00000506060 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
POLR2J3-211ENST00000506060 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
POLR2J3-211ENST00000506060 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
POLR2J3-211ENST00000506060 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
POLR2J3-211ENST00000506060 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
POLR2J3-211ENST00000506060 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
POLR2J3-211ENST00000506060 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
POLR2J3-211ENST00000506060 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
POLR2J3-211ENST00000506060 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
POLR2J3-211ENST00000506060 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
POLR2J3-211ENST00000506060 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
POLR2J3-211ENST00000506060 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
POLR2J3-211ENST00000506060 PRM1P04553 51 aa2.67□□□□□ -1.98
POLR2J3-211ENST00000506060 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
POLR2J3-211ENST00000506060 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
POLR2J3-211ENST00000506060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
POLR2J3-211ENST00000506060 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
POLR2J3-211ENST00000506060 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
POLR2J3-211ENST00000506060 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
POLR2J3-211ENST00000506060 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
POLR2J3-211ENST00000506060 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
POLR2J3-211ENST00000506060 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
POLR2J3-211ENST00000506060 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
POLR2J3-211ENST00000506060 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 148.6 ms