RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 CSAG1Q6PB30 78 aa0.81□□□□□ -2.28
LINC00616-202ENST00000505874 CHKB-CPT1BH3BT56 60 aa0.8□□□□□ -2.28
LINC00616-202ENST00000505874 PMAIP1Q13794 54 aa0.8□□□□□ -2.28
LINC00616-202ENST00000505874 SERP1Q9Y6X1 66 aa0.8□□□□□ -2.28
LINC00616-202ENST00000505874 H0YAA0 97 aa0.79□□□□□ -2.28
LINC00616-202ENST00000505874 KRTAP19-2Q3LHN2 52 aa0.79□□□□□ -2.28
LINC00616-202ENST00000505874 COA5Q86WW8 74 aa0.79□□□□□ -2.28
LINC00616-202ENST00000505874 CYSTM1Q9H1C7 97 aa0.79□□□□□ -2.28
LINC00616-202ENST00000505874 S4R3F8 94 aa0.79□□□□□ -2.28
LINC00616-202ENST00000505874 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
LINC00616-202ENST00000505874 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
LINC00616-202ENST00000505874 M0R2T5 61 aa0.78□□□□□ -2.28
LINC00616-202ENST00000505874 KRTAP20-1Q3LI63 56 aa0.78□□□□□ -2.28
LINC00616-202ENST00000505874 LCA10Q71F78 164 aa0.78□□□□□ -2.28
LINC00616-202ENST00000505874 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
LINC00616-202ENST00000505874 CRIPTQ9P021 101 aa0.78□□□□□ -2.28
LINC00616-202ENST00000505874 MT1HP80294 61 aa0.77□□□□□ -2.29
LINC00616-202ENST00000505874 Q1T7F1 81 aa0.77□□□□□ -2.29
LINC00616-202ENST00000505874 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
LINC00616-202ENST00000505874 USH2AO75445 5202 aa0.77□□□□□ -2.29
LINC00616-202ENST00000505874 A0A1B0GU69 56 aa0.76□□□□□ -2.29
LINC00616-202ENST00000505874 K7ERS5 55 aa0.76□□□□□ -2.29
LINC00616-202ENST00000505874 M0QZ58 72 aa0.76□□□□□ -2.29
LINC00616-202ENST00000505874 SSPOA2VEC9 5147 aa0.76□□□□□ -2.29
LINC00616-202ENST00000505874 UQCR11O14957 56 aa0.75□□□□□ -2.29
LINC00616-202ENST00000505874 Q5VV11 94 aa0.75□□□□□ -2.29
LINC00616-202ENST00000505874 A6NN06 94 aa0.74□□□□□ -2.29
LINC00616-202ENST00000505874 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
LINC00616-202ENST00000505874 MT2AP02795 61 aa0.73□□□□□ -2.29
LINC00616-202ENST00000505874 SPATA8Q6RVD6 105 aa0.73□□□□□ -2.29
LINC00616-202ENST00000505874 SPRR2GQ9BYE4 73 aa0.73□□□□□ -2.29
LINC00616-202ENST00000505874 A6NED7 52 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 MT1FP04733 61 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 MIR22HGQ0VDD5 57 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 KRTAP19-8Q3LI54 63 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 CDC42SE1Q9NRR8 79 aa0.72□□□□□ -2.29
LINC00616-202ENST00000505874 KTN1-AS1Q86SY8 53 aa0.71□□□□□ -2.3
LINC00616-202ENST00000505874 PRO2289Q9P1D8 64 aa0.71□□□□□ -2.3
LINC00616-202ENST00000505874 LINC01554Q52M75 96 aa0.7□□□□□ -2.3
LINC00616-202ENST00000505874 A0A0D9SG42 100 aa0.69□□□□□ -2.3
LINC00616-202ENST00000505874 BRK1Q8WUW1 75 aa0.69□□□□□ -2.3
LINC00616-202ENST00000505874 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
LINC00616-202ENST00000505874 KMT2DO14686 5537 aa0.68□□□□□ -2.3
LINC00616-202ENST00000505874 MT1BP07438 61 aa0.68□□□□□ -2.3
LINC00616-202ENST00000505874 KRTAP19-6Q3LI70 58 aa0.68□□□□□ -2.3
LINC00616-202ENST00000505874 MUC12Q9UKN1 5478 aa0.67□□□□□ -2.3
LINC00616-202ENST00000505874 TNP1P09430 55 aa0.67□□□□□ -2.3
LINC00616-202ENST00000505874 ROMO1P60602 79 aa0.67□□□□□ -2.3
LINC00616-202ENST00000505874 MT1XP80297 61 aa0.66□□□□□ -2.3
LINC00616-202ENST00000505874 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
LINC00616-202ENST00000505874 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
LINC00616-202ENST00000505874 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
LINC00616-202ENST00000505874 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
LINC00616-202ENST00000505874 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
LINC00616-202ENST00000505874 MT1GP13640 62 aa0.59□□□□□ -2.31
LINC00616-202ENST00000505874 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.31
LINC00616-202ENST00000505874 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
LINC00616-202ENST00000505874 MT1EP04732 61 aa0.58□□□□□ -2.32
LINC00616-202ENST00000505874 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
LINC00616-202ENST00000505874 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
LINC00616-202ENST00000505874 MT1LQ93083 61 aa0.57□□□□□ -2.32
LINC00616-202ENST00000505874 SPRR2EP22531 72 aa0.56□□□□□ -2.32
LINC00616-202ENST00000505874 SPRR2BP35325 72 aa0.56□□□□□ -2.32
LINC00616-202ENST00000505874 SPRR2AP35326 72 aa0.56□□□□□ -2.32
LINC00616-202ENST00000505874 INE1O15225 51 aa0.55□□□□□ -2.32
LINC00616-202ENST00000505874 MT1MQ8N339 61 aa0.55□□□□□ -2.32
LINC00616-202ENST00000505874 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
LINC00616-202ENST00000505874 SPRR2DP22532 72 aa0.54□□□□□ -2.32
LINC00616-202ENST00000505874 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
LINC00616-202ENST00000505874 MT1AP04731 61 aa0.49□□□□□ -2.33
LINC00616-202ENST00000505874 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
LINC00616-202ENST00000505874 MT4P47944 62 aa0.45□□□□□ -2.34
LINC00616-202ENST00000505874 KRTAP20-2Q3LI61 65 aa0.45□□□□□ -2.34
LINC00616-202ENST00000505874 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
LINC00616-202ENST00000505874 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
LINC00616-202ENST00000505874 PRM1P04553 51 aa0.32□□□□□ -2.36
LINC00616-202ENST00000505874 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 30.6 ms