RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
LETM1-203ENST00000505551 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
LETM1-203ENST00000505551 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
LETM1-203ENST00000505551 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
LETM1-203ENST00000505551 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
LETM1-203ENST00000505551 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LETM1-203ENST00000505551 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
LETM1-203ENST00000505551 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
LETM1-203ENST00000505551 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
LETM1-203ENST00000505551 MT1EP04732 61 aa4.33□□□□□ -1.72
LETM1-203ENST00000505551 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
LETM1-203ENST00000505551 MT1LQ93083 61 aa4.31□□□□□ -1.72
LETM1-203ENST00000505551 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
LETM1-203ENST00000505551 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
LETM1-203ENST00000505551 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
LETM1-203ENST00000505551 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
LETM1-203ENST00000505551 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
LETM1-203ENST00000505551 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
LETM1-203ENST00000505551 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
LETM1-203ENST00000505551 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
LETM1-203ENST00000505551 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.74
LETM1-203ENST00000505551 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
LETM1-203ENST00000505551 MT1GP13640 62 aa4.1□□□□□ -1.75
LETM1-203ENST00000505551 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
LETM1-203ENST00000505551 MT1MQ8N339 61 aa4.07□□□□□ -1.76
LETM1-203ENST00000505551 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
LETM1-203ENST00000505551 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
LETM1-203ENST00000505551 PRM1P04553 51 aa3.98□□□□□ -1.77
LETM1-203ENST00000505551 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
LETM1-203ENST00000505551 MT1AP04731 61 aa3.92□□□□□ -1.78
LETM1-203ENST00000505551 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.78
LETM1-203ENST00000505551 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
LETM1-203ENST00000505551 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
LETM1-203ENST00000505551 SPRR2EP22531 72 aa3.85□□□□□ -1.79
LETM1-203ENST00000505551 SPRR2BP35325 72 aa3.85□□□□□ -1.79
LETM1-203ENST00000505551 SPRR2AP35326 72 aa3.85□□□□□ -1.79
LETM1-203ENST00000505551 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
LETM1-203ENST00000505551 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
LETM1-203ENST00000505551 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
LETM1-203ENST00000505551 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
LETM1-203ENST00000505551 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
LETM1-203ENST00000505551 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
LETM1-203ENST00000505551 SPRR2DP22532 72 aa3.68□□□□□ -1.82
LETM1-203ENST00000505551 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
LETM1-203ENST00000505551 NEBP20929 6669 aa3.54□□□□□ -1.84
LETM1-203ENST00000505551 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
LETM1-203ENST00000505551 MT4P47944 62 aa3.33□□□□□ -1.88
LETM1-203ENST00000505551 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
LETM1-203ENST00000505551 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
LETM1-203ENST00000505551 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
LETM1-203ENST00000505551 MT3P25713 68 aa3.24□□□□□ -1.89
LETM1-203ENST00000505551 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
LETM1-203ENST00000505551 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
LETM1-203ENST00000505551 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
LETM1-203ENST00000505551 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
LETM1-203ENST00000505551 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
LETM1-203ENST00000505551 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
LETM1-203ENST00000505551 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
LETM1-203ENST00000505551 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
LETM1-203ENST00000505551 KRTAP5-3Q6L8H2 238 aa2.93□□□□□ -1.94
LETM1-203ENST00000505551 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
LETM1-203ENST00000505551 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
LETM1-203ENST00000505551 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
LETM1-203ENST00000505551 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
LETM1-203ENST00000505551 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
LETM1-203ENST00000505551 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
LETM1-203ENST00000505551 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
LETM1-203ENST00000505551 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
LETM1-203ENST00000505551 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
LETM1-203ENST00000505551 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
LETM1-203ENST00000505551 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
LETM1-203ENST00000505551 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
LETM1-203ENST00000505551 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
LETM1-203ENST00000505551 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
LETM1-203ENST00000505551 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
LETM1-203ENST00000505551 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
LETM1-203ENST00000505551 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
LETM1-203ENST00000505551 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms