RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
DDX41-205ENST00000505081 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
DDX41-205ENST00000505081 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
DDX41-205ENST00000505081 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
DDX41-205ENST00000505081 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
DDX41-205ENST00000505081 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
DDX41-205ENST00000505081 MT1GP13640 62 aa5.24□□□□□ -1.57
DDX41-205ENST00000505081 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
DDX41-205ENST00000505081 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
DDX41-205ENST00000505081 MT1MQ8N339 61 aa5.16□□□□□ -1.58
DDX41-205ENST00000505081 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
DDX41-205ENST00000505081 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
DDX41-205ENST00000505081 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
DDX41-205ENST00000505081 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
DDX41-205ENST00000505081 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
DDX41-205ENST00000505081 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
DDX41-205ENST00000505081 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
DDX41-205ENST00000505081 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
DDX41-205ENST00000505081 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.64
DDX41-205ENST00000505081 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
DDX41-205ENST00000505081 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
DDX41-205ENST00000505081 MT1AP04731 61 aa4.6□□□□□ -1.67
DDX41-205ENST00000505081 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
DDX41-205ENST00000505081 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
DDX41-205ENST00000505081 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
DDX41-205ENST00000505081 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
DDX41-205ENST00000505081 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
DDX41-205ENST00000505081 SPRR2EP22531 72 aa4.48□□□□□ -1.69
DDX41-205ENST00000505081 SPRR2BP35325 72 aa4.48□□□□□ -1.69
DDX41-205ENST00000505081 SPRR2AP35326 72 aa4.48□□□□□ -1.69
DDX41-205ENST00000505081 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
DDX41-205ENST00000505081 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
DDX41-205ENST00000505081 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
DDX41-205ENST00000505081 PRM1P04553 51 aa4.35□□□□□ -1.71
DDX41-205ENST00000505081 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.72
DDX41-205ENST00000505081 SPRR2DP22532 72 aa4.27□□□□□ -1.73
DDX41-205ENST00000505081 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
DDX41-205ENST00000505081 MT3P25713 68 aa4.12□□□□□ -1.75
DDX41-205ENST00000505081 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
DDX41-205ENST00000505081 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
DDX41-205ENST00000505081 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
DDX41-205ENST00000505081 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
DDX41-205ENST00000505081 NEBP20929 6669 aa3.86□□□□□ -1.79
DDX41-205ENST00000505081 MT4P47944 62 aa3.85□□□□□ -1.79
DDX41-205ENST00000505081 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
DDX41-205ENST00000505081 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
DDX41-205ENST00000505081 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
DDX41-205ENST00000505081 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.81
DDX41-205ENST00000505081 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
DDX41-205ENST00000505081 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
DDX41-205ENST00000505081 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
DDX41-205ENST00000505081 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
DDX41-205ENST00000505081 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
DDX41-205ENST00000505081 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
DDX41-205ENST00000505081 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
DDX41-205ENST00000505081 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
DDX41-205ENST00000505081 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
DDX41-205ENST00000505081 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
DDX41-205ENST00000505081 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
DDX41-205ENST00000505081 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
DDX41-205ENST00000505081 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
DDX41-205ENST00000505081 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
DDX41-205ENST00000505081 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
DDX41-205ENST00000505081 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
DDX41-205ENST00000505081 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
DDX41-205ENST00000505081 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
DDX41-205ENST00000505081 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
DDX41-205ENST00000505081 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
DDX41-205ENST00000505081 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
DDX41-205ENST00000505081 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
DDX41-205ENST00000505081 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
DDX41-205ENST00000505081 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
DDX41-205ENST00000505081 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
DDX41-205ENST00000505081 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
DDX41-205ENST00000505081 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
DDX41-205ENST00000505081 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
DDX41-205ENST00000505081 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
DDX41-205ENST00000505081 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 117.2 ms