RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
ATP2C1-208ENST00000504948 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ATP2C1-208ENST00000504948 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
ATP2C1-208ENST00000504948 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
ATP2C1-208ENST00000504948 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
ATP2C1-208ENST00000504948 MT1BP07438 61 aa2.73□□□□□ -1.97
ATP2C1-208ENST00000504948 MT1GP13640 62 aa2.73□□□□□ -1.97
ATP2C1-208ENST00000504948 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
ATP2C1-208ENST00000504948 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
ATP2C1-208ENST00000504948 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
ATP2C1-208ENST00000504948 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
ATP2C1-208ENST00000504948 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
ATP2C1-208ENST00000504948 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
ATP2C1-208ENST00000504948 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
ATP2C1-208ENST00000504948 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
ATP2C1-208ENST00000504948 NEBP20929 6669 aa2.6□□□□□ -1.99
ATP2C1-208ENST00000504948 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
ATP2C1-208ENST00000504948 PRM1P04553 51 aa2.51□□□□□ -2.01
ATP2C1-208ENST00000504948 MT1LQ93083 61 aa2.47□□□□□ -2.01
ATP2C1-208ENST00000504948 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
ATP2C1-208ENST00000504948 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
ATP2C1-208ENST00000504948 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
ATP2C1-208ENST00000504948 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
ATP2C1-208ENST00000504948 MT1EP04732 61 aa2.41□□□□□ -2.02
ATP2C1-208ENST00000504948 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.02
ATP2C1-208ENST00000504948 KRTAP4-6Q9BYQ5 205 aa2.4□□□□□ -2.03
ATP2C1-208ENST00000504948 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
ATP2C1-208ENST00000504948 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
ATP2C1-208ENST00000504948 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
ATP2C1-208ENST00000504948 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
ATP2C1-208ENST00000504948 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
ATP2C1-208ENST00000504948 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
ATP2C1-208ENST00000504948 LCE5AQ5TCM9 118 aa2.3□□□□□ -2.04
ATP2C1-208ENST00000504948 MT1MQ8N339 61 aa2.3□□□□□ -2.04
ATP2C1-208ENST00000504948 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
ATP2C1-208ENST00000504948 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
ATP2C1-208ENST00000504948 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
ATP2C1-208ENST00000504948 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
ATP2C1-208ENST00000504948 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
ATP2C1-208ENST00000504948 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
ATP2C1-208ENST00000504948 SPRR2EP22531 72 aa2.2□□□□□ -2.06
ATP2C1-208ENST00000504948 SPRR2BP35325 72 aa2.2□□□□□ -2.06
ATP2C1-208ENST00000504948 SPRR2AP35326 72 aa2.2□□□□□ -2.06
ATP2C1-208ENST00000504948 LCE1DQ5T752 114 aa2.14□□□□□ -2.07
ATP2C1-208ENST00000504948 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
ATP2C1-208ENST00000504948 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
ATP2C1-208ENST00000504948 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
ATP2C1-208ENST00000504948 MT4P47944 62 aa2.09□□□□□ -2.07
ATP2C1-208ENST00000504948 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
ATP2C1-208ENST00000504948 SPRR2DP22532 72 aa2.09□□□□□ -2.08
ATP2C1-208ENST00000504948 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
ATP2C1-208ENST00000504948 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
ATP2C1-208ENST00000504948 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
ATP2C1-208ENST00000504948 KRTAP9-9Q9BYP9 154 aa2.04□□□□□ -2.08
ATP2C1-208ENST00000504948 KRTAP9-4Q9BYQ2 154 aa2.04□□□□□ -2.08
ATP2C1-208ENST00000504948 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
ATP2C1-208ENST00000504948 MT1AP04731 61 aa2.02□□□□□ -2.09
ATP2C1-208ENST00000504948 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
ATP2C1-208ENST00000504948 MT3P25713 68 aa2.01□□□□□ -2.09
ATP2C1-208ENST00000504948 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
ATP2C1-208ENST00000504948 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
ATP2C1-208ENST00000504948 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
ATP2C1-208ENST00000504948 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
ATP2C1-208ENST00000504948 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
ATP2C1-208ENST00000504948 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
ATP2C1-208ENST00000504948 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
ATP2C1-208ENST00000504948 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
ATP2C1-208ENST00000504948 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
ATP2C1-208ENST00000504948 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
ATP2C1-208ENST00000504948 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
ATP2C1-208ENST00000504948 LCE1CQ5T751 118 aa1.59□□□□□ -2.16
ATP2C1-208ENST00000504948 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
ATP2C1-208ENST00000504948 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
ATP2C1-208ENST00000504948 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
ATP2C1-208ENST00000504948 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
ATP2C1-208ENST00000504948 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
ATP2C1-208ENST00000504948 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms