RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 ANK3Q12955 4377 aaKnown RBP0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 MUC3AQ02505 3323 aa0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 LOC400499M0QZD8 3231 aa0.13□□□□□ -2.39
SRFBP1-202ENST00000504881 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 UTRNP46939 3433 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH9Q9NYC9 4486 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 CSMD2Q7Z408 3487 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 XIRP2A4UGR9 3374 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 GOLGB1Q14789 3259 aaKnown RBP0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 MT2AP02795 61 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1GP13640 62 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1MQ8N339 61 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 CENPFP49454 3210 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 MYCBP2O75592 4640 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 SMG1Q96Q15 3661 aaKnown RBP0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 SPEGQ15772 3267 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
SRFBP1-202ENST00000504881 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 ASPMQ8IZT6 3477 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH2Q9P225 4427 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 USP34Q70CQ2 3546 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 SPENQ96T58 3664 aaKnown RBP0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1HL1P0DM35 61 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 KRTAP19-7Q3SYF9 63 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 UNC80Q8N2C7 3258 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH14Q0VDD8 3507 aa0.11□□□□□ -2.39
SRFBP1-202ENST00000504881 PKHD1L1Q86WI1 4243 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1BP07438 61 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 KRTAP19-2Q3LHN2 52 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 KRTAP6-1Q3LI64 71 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 HERC1Q15751 4861 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 DNAH8Q96JB1 4490 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 NEBP20929 6669 aa0.1□□□□□ -2.39
SRFBP1-202ENST00000504881 MYO15AQ9UKN7 3530 aa0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 BRCA2P51587 3418 aa0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 LPAP08519 4548 aa0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 APOBP04114 4563 aaKnown RBP0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 VPS13CQ709C8 3753 aa0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.39
SRFBP1-202ENST00000504881 MT1FP04733 61 aa0.09□□□□□ -2.4
SRFBP1-202ENST00000504881 FAT3Q8TDW7 4589 aa0.09□□□□□ -2.4
SRFBP1-202ENST00000504881 DNAH10Q8IVF4 4471 aa0.09□□□□□ -2.4
SRFBP1-202ENST00000504881 LRP1BQ9NZR2 4599 aa0.09□□□□□ -2.4
SRFBP1-202ENST00000504881 DNAH17Q9UFH2 4485 aa0.08□□□□□ -2.4
SRFBP1-202ENST00000504881 DYNC1H1Q14204 4646 aaKnown RBP0.08□□□□□ -2.4
SRFBP1-202ENST00000504881 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
SRFBP1-202ENST00000504881 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
SRFBP1-202ENST00000504881 DNAH5Q8TE73 4624 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 PLECQ15149 4684 aaKnown RBP0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 STARD9Q9P2P6 4700 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 LRP2P98164 4655 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 WDFY3Q8IZQ1 3526 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 FAT1Q14517 4588 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
SRFBP1-202ENST00000504881 MUC17Q685J3 4493 aa0.06□□□□□ -2.4
SRFBP1-202ENST00000504881 KMT2CQ8NEZ4 4911 aaKnown RBP0.06□□□□□ -2.4
SRFBP1-202ENST00000504881 CDH23Q9H251 3354 aa0.05□□□□□ -2.4
SRFBP1-202ENST00000504881 MUC2Q02817 5179 aa0.04□□□□□ -2.4
SRFBP1-202ENST00000504881 UBR4Q5T4S7 5183 aa0.04□□□□□ -2.4
SRFBP1-202ENST00000504881 MT4P47944 62 aa0.04□□□□□ -2.4
SRFBP1-202ENST00000504881 BIRC6Q9NR09 4857 aa0.04□□□□□ -2.4
SRFBP1-202ENST00000504881 RYR1P21817 5038 aa0.04□□□□□ -2.4
SRFBP1-202ENST00000504881 RYR2Q92736 4967 aa0.03□□□□□ -2.4
SRFBP1-202ENST00000504881 DNHD1Q96M86 4753 aa0.03□□□□□ -2.41
SRFBP1-202ENST00000504881 RYR3Q15413 4870 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 HERC2O95714 4834 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 KRTAP20-2Q3LI61 65 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 KRTAP19-6Q3LI70 58 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 USH2AO75445 5202 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 RNF213Q63HN8 5207 aa0.02□□□□□ -2.41
SRFBP1-202ENST00000504881 HYDINQ4G0P3 5121 aa0.01□□□□□ -2.41
SRFBP1-202ENST00000504881 EPPK1P58107 5090 aaKnown RBP0.01□□□□□ -2.41
SRFBP1-202ENST00000504881 ABCA13Q86UQ4 5058 aa0.01□□□□□ -2.41
SRFBP1-202ENST00000504881 KIAA1109Q2LD37 5005 aa0.01□□□□□ -2.41
SRFBP1-202ENST00000504881 KRTAP20-1Q3LI63 56 aa-0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 56.9 ms