RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 R4GN34 69 aa2.73□□□□□ -1.97
COL4A5-207ENST00000504541 A6NN06 94 aa2.72□□□□□ -1.97
COL4A5-207ENST00000504541 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
COL4A5-207ENST00000504541 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
COL4A5-207ENST00000504541 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
COL4A5-207ENST00000504541 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
COL4A5-207ENST00000504541 MT1FP04733 61 aa2.7□□□□□ -1.98
COL4A5-207ENST00000504541 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
COL4A5-207ENST00000504541 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
COL4A5-207ENST00000504541 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
COL4A5-207ENST00000504541 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
COL4A5-207ENST00000504541 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
COL4A5-207ENST00000504541 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
COL4A5-207ENST00000504541 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
COL4A5-207ENST00000504541 A0A0D9SG42 100 aa2.61□□□□□ -1.99
COL4A5-207ENST00000504541 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
COL4A5-207ENST00000504541 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
COL4A5-207ENST00000504541 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
COL4A5-207ENST00000504541 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
COL4A5-207ENST00000504541 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
COL4A5-207ENST00000504541 MT1BP07438 61 aa2.57□□□□□ -2
COL4A5-207ENST00000504541 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
COL4A5-207ENST00000504541 ROMO1P60602 79 aa2.5□□□□□ -2.01
COL4A5-207ENST00000504541 USH2AO75445 5202 aa2.5□□□□□ -2.01
COL4A5-207ENST00000504541 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
COL4A5-207ENST00000504541 MT1XP80297 61 aa2.47□□□□□ -2.01
COL4A5-207ENST00000504541 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
COL4A5-207ENST00000504541 TNP1P09430 55 aa2.45□□□□□ -2.02
COL4A5-207ENST00000504541 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
COL4A5-207ENST00000504541 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
COL4A5-207ENST00000504541 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
COL4A5-207ENST00000504541 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
COL4A5-207ENST00000504541 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
COL4A5-207ENST00000504541 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
COL4A5-207ENST00000504541 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
COL4A5-207ENST00000504541 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
COL4A5-207ENST00000504541 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
COL4A5-207ENST00000504541 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
COL4A5-207ENST00000504541 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
COL4A5-207ENST00000504541 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
COL4A5-207ENST00000504541 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
COL4A5-207ENST00000504541 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
COL4A5-207ENST00000504541 KMT2DO14686 5537 aa2.19□□□□□ -2.06
COL4A5-207ENST00000504541 MT1EP04732 61 aa2.18□□□□□ -2.06
COL4A5-207ENST00000504541 MT1GP13640 62 aa2.15□□□□□ -2.07
COL4A5-207ENST00000504541 NEBP20929 6669 aa2.14□□□□□ -2.07
COL4A5-207ENST00000504541 MT1LQ93083 61 aa2.14□□□□□ -2.07
COL4A5-207ENST00000504541 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
COL4A5-207ENST00000504541 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
COL4A5-207ENST00000504541 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
COL4A5-207ENST00000504541 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
COL4A5-207ENST00000504541 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
COL4A5-207ENST00000504541 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
COL4A5-207ENST00000504541 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
COL4A5-207ENST00000504541 SPRR2EP22531 72 aa2.07□□□□□ -2.08
COL4A5-207ENST00000504541 SPRR2BP35325 72 aa2.07□□□□□ -2.08
COL4A5-207ENST00000504541 SPRR2AP35326 72 aa2.07□□□□□ -2.08
COL4A5-207ENST00000504541 INE1O15225 51 aa2.05□□□□□ -2.08
COL4A5-207ENST00000504541 MT1MQ8N339 61 aa2.05□□□□□ -2.08
COL4A5-207ENST00000504541 SPRR2DP22532 72 aa2.02□□□□□ -2.09
COL4A5-207ENST00000504541 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
COL4A5-207ENST00000504541 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
COL4A5-207ENST00000504541 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
COL4A5-207ENST00000504541 MT1AP04731 61 aa1.84□□□□□ -2.11
COL4A5-207ENST00000504541 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
COL4A5-207ENST00000504541 MT4P47944 62 aa1.76□□□□□ -2.13
COL4A5-207ENST00000504541 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
COL4A5-207ENST00000504541 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
COL4A5-207ENST00000504541 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
COL4A5-207ENST00000504541 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
COL4A5-207ENST00000504541 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
COL4A5-207ENST00000504541 MUC5ACP98088 5654 aa1.46□□□□□ -2.17
COL4A5-207ENST00000504541 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
COL4A5-207ENST00000504541 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
COL4A5-207ENST00000504541 PRM1P04553 51 aa1.25□□□□□ -2.21
COL4A5-207ENST00000504541 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
COL4A5-207ENST00000504541 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
COL4A5-207ENST00000504541 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 38.5 ms