RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
HMGCR-204ENST00000504466 A6NN06 94 aa2.35□□□□□ -2.03
HMGCR-204ENST00000504466 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
HMGCR-204ENST00000504466 M0QZ58 72 aa2.34□□□□□ -2.03
HMGCR-204ENST00000504466 K7ERS5 55 aa2.32□□□□□ -2.04
HMGCR-204ENST00000504466 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
HMGCR-204ENST00000504466 A0A0D9SG42 100 aa2.31□□□□□ -2.04
HMGCR-204ENST00000504466 MT2AP02795 61 aa2.31□□□□□ -2.04
HMGCR-204ENST00000504466 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
HMGCR-204ENST00000504466 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
HMGCR-204ENST00000504466 MT1FP04733 61 aa2.3□□□□□ -2.04
HMGCR-204ENST00000504466 R4GN34 69 aa2.3□□□□□ -2.04
HMGCR-204ENST00000504466 CRIPTQ9P021 101 aa2.29□□□□□ -2.04
HMGCR-204ENST00000504466 M0R2T5 61 aa2.28□□□□□ -2.04
HMGCR-204ENST00000504466 SPRR2GQ9BYE4 73 aa2.27□□□□□ -2.05
HMGCR-204ENST00000504466 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
HMGCR-204ENST00000504466 KTN1-AS1Q86SY8 53 aa2.24□□□□□ -2.05
HMGCR-204ENST00000504466 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
HMGCR-204ENST00000504466 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
HMGCR-204ENST00000504466 MT1BP07438 61 aa2.2□□□□□ -2.06
HMGCR-204ENST00000504466 ROMO1P60602 79 aa2.2□□□□□ -2.06
HMGCR-204ENST00000504466 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
HMGCR-204ENST00000504466 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
HMGCR-204ENST00000504466 MT1XP80297 61 aa2.13□□□□□ -2.07
HMGCR-204ENST00000504466 USH2AO75445 5202 aa2.12□□□□□ -2.07
HMGCR-204ENST00000504466 TNP1P09430 55 aa2.06□□□□□ -2.08
HMGCR-204ENST00000504466 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
HMGCR-204ENST00000504466 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
HMGCR-204ENST00000504466 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
HMGCR-204ENST00000504466 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
HMGCR-204ENST00000504466 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
HMGCR-204ENST00000504466 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
HMGCR-204ENST00000504466 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
HMGCR-204ENST00000504466 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
HMGCR-204ENST00000504466 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
HMGCR-204ENST00000504466 KMT2DO14686 5537 aa1.92□□□□□ -2.1
HMGCR-204ENST00000504466 KRTAP19-5Q3LI72 72 aa1.92□□□□□ -2.1
HMGCR-204ENST00000504466 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
HMGCR-204ENST00000504466 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
HMGCR-204ENST00000504466 MT1EP04732 61 aa1.85□□□□□ -2.11
HMGCR-204ENST00000504466 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
HMGCR-204ENST00000504466 MT1LQ93083 61 aa1.82□□□□□ -2.12
HMGCR-204ENST00000504466 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
HMGCR-204ENST00000504466 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
HMGCR-204ENST00000504466 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
HMGCR-204ENST00000504466 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
HMGCR-204ENST00000504466 MT1GP13640 62 aa1.75□□□□□ -2.13
HMGCR-204ENST00000504466 MT1MQ8N339 61 aa1.74□□□□□ -2.13
HMGCR-204ENST00000504466 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
HMGCR-204ENST00000504466 SPRR2EP22531 72 aa1.66□□□□□ -2.14
HMGCR-204ENST00000504466 SPRR2BP35325 72 aa1.66□□□□□ -2.14
HMGCR-204ENST00000504466 SPRR2AP35326 72 aa1.66□□□□□ -2.14
HMGCR-204ENST00000504466 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
HMGCR-204ENST00000504466 KRTAP2-3P0C7H8 128 aa1.62□□□□□ -2.15
HMGCR-204ENST00000504466 KRTAP2-4Q9BYR9 128 aa1.62□□□□□ -2.15
HMGCR-204ENST00000504466 KRTAP2-1Q9BYU5 128 aa1.62□□□□□ -2.15
HMGCR-204ENST00000504466 SPRR2DP22532 72 aa1.59□□□□□ -2.15
HMGCR-204ENST00000504466 NEBP20929 6669 aa1.59□□□□□ -2.16
HMGCR-204ENST00000504466 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.16
HMGCR-204ENST00000504466 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
HMGCR-204ENST00000504466 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
HMGCR-204ENST00000504466 MT1AP04731 61 aa1.54□□□□□ -2.16
HMGCR-204ENST00000504466 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
HMGCR-204ENST00000504466 INE1O15225 51 aa1.42□□□□□ -2.18
HMGCR-204ENST00000504466 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
HMGCR-204ENST00000504466 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
HMGCR-204ENST00000504466 MT4P47944 62 aa1.39□□□□□ -2.19
HMGCR-204ENST00000504466 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
HMGCR-204ENST00000504466 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
HMGCR-204ENST00000504466 PRM1P04553 51 aa1.16□□□□□ -2.22
HMGCR-204ENST00000504466 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
HMGCR-204ENST00000504466 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
HMGCR-204ENST00000504466 GPR98Q8WXG9 6306 aa1.01□□□□□ -2.25
HMGCR-204ENST00000504466 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
HMGCR-204ENST00000504466 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
HMGCR-204ENST00000504466 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
HMGCR-204ENST00000504466 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
HMGCR-204ENST00000504466 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms