RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
PAPD4-207ENST00000504233 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
PAPD4-207ENST00000504233 MT1EP04732 61 aa3.9□□□□□ -1.78
PAPD4-207ENST00000504233 MT1LQ93083 61 aa3.9□□□□□ -1.79
PAPD4-207ENST00000504233 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
PAPD4-207ENST00000504233 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
PAPD4-207ENST00000504233 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
PAPD4-207ENST00000504233 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
PAPD4-207ENST00000504233 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
PAPD4-207ENST00000504233 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
PAPD4-207ENST00000504233 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
PAPD4-207ENST00000504233 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
PAPD4-207ENST00000504233 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
PAPD4-207ENST00000504233 MT1GP13640 62 aa3.72□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PAPD4-207ENST00000504233 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
PAPD4-207ENST00000504233 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
PAPD4-207ENST00000504233 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
PAPD4-207ENST00000504233 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
PAPD4-207ENST00000504233 MT1MQ8N339 61 aa3.66□□□□□ -1.82
PAPD4-207ENST00000504233 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
PAPD4-207ENST00000504233 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
PAPD4-207ENST00000504233 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.82
PAPD4-207ENST00000504233 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
PAPD4-207ENST00000504233 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
PAPD4-207ENST00000504233 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
PAPD4-207ENST00000504233 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
PAPD4-207ENST00000504233 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
PAPD4-207ENST00000504233 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
PAPD4-207ENST00000504233 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
PAPD4-207ENST00000504233 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
PAPD4-207ENST00000504233 PRM1P04553 51 aa3.34□□□□□ -1.87
PAPD4-207ENST00000504233 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
PAPD4-207ENST00000504233 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
PAPD4-207ENST00000504233 SPRR2EP22531 72 aa3.27□□□□□ -1.89
PAPD4-207ENST00000504233 SPRR2BP35325 72 aa3.27□□□□□ -1.89
PAPD4-207ENST00000504233 SPRR2AP35326 72 aa3.27□□□□□ -1.89
PAPD4-207ENST00000504233 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
PAPD4-207ENST00000504233 MT1AP04731 61 aa3.24□□□□□ -1.89
PAPD4-207ENST00000504233 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
PAPD4-207ENST00000504233 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
PAPD4-207ENST00000504233 MT3P25713 68 aa3.2□□□□□ -1.9
PAPD4-207ENST00000504233 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
PAPD4-207ENST00000504233 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
PAPD4-207ENST00000504233 SPRR2DP22532 72 aa3.12□□□□□ -1.91
PAPD4-207ENST00000504233 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
PAPD4-207ENST00000504233 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
PAPD4-207ENST00000504233 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
PAPD4-207ENST00000504233 NEBP20929 6669 aa2.86□□□□□ -1.95
PAPD4-207ENST00000504233 MT4P47944 62 aa2.82□□□□□ -1.96
PAPD4-207ENST00000504233 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
PAPD4-207ENST00000504233 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PAPD4-207ENST00000504233 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
PAPD4-207ENST00000504233 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PAPD4-207ENST00000504233 MUC5ACP98088 5654 aa2.56□□□□□ -2
PAPD4-207ENST00000504233 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
PAPD4-207ENST00000504233 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
PAPD4-207ENST00000504233 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
PAPD4-207ENST00000504233 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
PAPD4-207ENST00000504233 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.05
PAPD4-207ENST00000504233 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
PAPD4-207ENST00000504233 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
PAPD4-207ENST00000504233 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
PAPD4-207ENST00000504233 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
PAPD4-207ENST00000504233 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
PAPD4-207ENST00000504233 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.07
PAPD4-207ENST00000504233 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PAPD4-207ENST00000504233 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
PAPD4-207ENST00000504233 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
PAPD4-207ENST00000504233 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
PAPD4-207ENST00000504233 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
PAPD4-207ENST00000504233 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
PAPD4-207ENST00000504233 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 76.3 ms