RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MT1LQ93083 61 aa4.06□□□□□ -1.76
USP46-204ENST00000503060 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
USP46-204ENST00000503060 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
USP46-204ENST00000503060 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
USP46-204ENST00000503060 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
USP46-204ENST00000503060 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
USP46-204ENST00000503060 MT3P25713 68 aa3.96□□□□□ -1.77
USP46-204ENST00000503060 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
USP46-204ENST00000503060 KRTAP9-2Q9BYQ4 174 aa3.94□□□□□ -1.78
USP46-204ENST00000503060 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
USP46-204ENST00000503060 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
USP46-204ENST00000503060 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
USP46-204ENST00000503060 MT1GP13640 62 aa3.87□□□□□ -1.79
USP46-204ENST00000503060 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
USP46-204ENST00000503060 MT1MQ8N339 61 aa3.85□□□□□ -1.79
USP46-204ENST00000503060 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
USP46-204ENST00000503060 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
USP46-204ENST00000503060 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.8
USP46-204ENST00000503060 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
USP46-204ENST00000503060 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
USP46-204ENST00000503060 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
USP46-204ENST00000503060 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
USP46-204ENST00000503060 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
USP46-204ENST00000503060 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
USP46-204ENST00000503060 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
USP46-204ENST00000503060 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
USP46-204ENST00000503060 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
USP46-204ENST00000503060 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
USP46-204ENST00000503060 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
USP46-204ENST00000503060 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
USP46-204ENST00000503060 SPRR2EP22531 72 aa3.59□□□□□ -1.83
USP46-204ENST00000503060 SPRR2BP35325 72 aa3.59□□□□□ -1.83
USP46-204ENST00000503060 SPRR2AP35326 72 aa3.59□□□□□ -1.83
USP46-204ENST00000503060 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
USP46-204ENST00000503060 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
USP46-204ENST00000503060 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
USP46-204ENST00000503060 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
USP46-204ENST00000503060 SPRR2DP22532 72 aa3.45□□□□□ -1.86
USP46-204ENST00000503060 MT1AP04731 61 aa3.44□□□□□ -1.86
USP46-204ENST00000503060 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
USP46-204ENST00000503060 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
USP46-204ENST00000503060 LCE3BQ5TA77 95 aa3.4□□□□□ -1.87
USP46-204ENST00000503060 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
USP46-204ENST00000503060 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
USP46-204ENST00000503060 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
USP46-204ENST00000503060 NEBP20929 6669 aa3.21□□□□□ -1.89
USP46-204ENST00000503060 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
USP46-204ENST00000503060 PRM1P04553 51 aa3.12□□□□□ -1.91
USP46-204ENST00000503060 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
USP46-204ENST00000503060 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
USP46-204ENST00000503060 MT4P47944 62 aa3.01□□□□□ -1.93
USP46-204ENST00000503060 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
USP46-204ENST00000503060 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
USP46-204ENST00000503060 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
USP46-204ENST00000503060 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
USP46-204ENST00000503060 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
USP46-204ENST00000503060 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
USP46-204ENST00000503060 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
USP46-204ENST00000503060 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
USP46-204ENST00000503060 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
USP46-204ENST00000503060 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
USP46-204ENST00000503060 MUC5ACP98088 5654 aa2.53□□□□□ -2
USP46-204ENST00000503060 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
USP46-204ENST00000503060 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
USP46-204ENST00000503060 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
USP46-204ENST00000503060 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
USP46-204ENST00000503060 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
USP46-204ENST00000503060 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
USP46-204ENST00000503060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
USP46-204ENST00000503060 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
USP46-204ENST00000503060 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
USP46-204ENST00000503060 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
USP46-204ENST00000503060 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
USP46-204ENST00000503060 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
USP46-204ENST00000503060 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
USP46-204ENST00000503060 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
USP46-204ENST00000503060 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
USP46-204ENST00000503060 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 43.1 ms