RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
RFC1-205ENST00000502991 TNXBP22105 4242 aa1.44□□□□□ -2.18
RFC1-205ENST00000502991 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
RFC1-205ENST00000502991 EPPK1P58107 5090 aaKnown RBP1.43□□□□□ -2.18
RFC1-205ENST00000502991 MYCBP2O75592 4640 aa1.42□□□□□ -2.18
RFC1-205ENST00000502991 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
RFC1-205ENST00000502991 HERC2O95714 4834 aa1.38□□□□□ -2.19
RFC1-205ENST00000502991 BIRC6Q9NR09 4857 aa1.38□□□□□ -2.19
RFC1-205ENST00000502991 LRP2P98164 4655 aa1.38□□□□□ -2.19
RFC1-205ENST00000502991 H0YAA0 97 aa1.36□□□□□ -2.19
RFC1-205ENST00000502991 S4R3F8 94 aa1.36□□□□□ -2.19
RFC1-205ENST00000502991 LPAP08519 4548 aa1.34□□□□□ -2.19
RFC1-205ENST00000502991 ABCA13Q86UQ4 5058 aa1.34□□□□□ -2.2
RFC1-205ENST00000502991 M0QZ58 72 aa1.32□□□□□ -2.2
RFC1-205ENST00000502991 KRTAP19-2Q3LHN2 52 aa1.32□□□□□ -2.2
RFC1-205ENST00000502991 MUC17Q685J3 4493 aa1.32□□□□□ -2.2
RFC1-205ENST00000502991 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
RFC1-205ENST00000502991 HERC1Q15751 4861 aa1.29□□□□□ -2.2
RFC1-205ENST00000502991 PCLOQ9Y6V0 5065 aa1.28□□□□□ -2.2
RFC1-205ENST00000502991 HMCN2Q8NDA2 5059 aa1.27□□□□□ -2.21
RFC1-205ENST00000502991 MT1HP80294 61 aa1.25□□□□□ -2.21
RFC1-205ENST00000502991 MUC2Q02817 5179 aa1.25□□□□□ -2.21
RFC1-205ENST00000502991 FLGP20930 4061 aaPredicted RBP1.24□□□□□ -2.21
RFC1-205ENST00000502991 M0R2T5 61 aa1.24□□□□□ -2.21
RFC1-205ENST00000502991 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
RFC1-205ENST00000502991 MT2AP02795 61 aa1.2□□□□□ -2.22
RFC1-205ENST00000502991 KRTAP19-8Q3LI54 63 aa1.19□□□□□ -2.22
RFC1-205ENST00000502991 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
RFC1-205ENST00000502991 FAT4Q6V0I7 4981 aa1.18□□□□□ -2.22
RFC1-205ENST00000502991 MT1FP04733 61 aa1.18□□□□□ -2.22
RFC1-205ENST00000502991 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
RFC1-205ENST00000502991 TNP1P09430 55 aa1.15□□□□□ -2.23
RFC1-205ENST00000502991 MT1BP07438 61 aa1.14□□□□□ -2.23
RFC1-205ENST00000502991 MT1XP80297 61 aa1.11□□□□□ -2.23
RFC1-205ENST00000502991 KRTAP19-6Q3LI70 58 aa1.08□□□□□ -2.24
RFC1-205ENST00000502991 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
RFC1-205ENST00000502991 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
RFC1-205ENST00000502991 KRTAP2-3P0C7H8 128 aa1□□□□□ -2.25
RFC1-205ENST00000502991 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
RFC1-205ENST00000502991 KRTAP2-4Q9BYR9 128 aa1□□□□□ -2.25
RFC1-205ENST00000502991 KRTAP2-1Q9BYU5 128 aa1□□□□□ -2.25
RFC1-205ENST00000502991 SSPOA2VEC9 5147 aa1□□□□□ -2.25
RFC1-205ENST00000502991 USH2AO75445 5202 aa0.99□□□□□ -2.25
RFC1-205ENST00000502991 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
RFC1-205ENST00000502991 FSIP2Q5CZC0 6907 aa0.98□□□□□ -2.25
RFC1-205ENST00000502991 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
RFC1-205ENST00000502991 MT1EP04732 61 aa0.97□□□□□ -2.25
RFC1-205ENST00000502991 MT1GP13640 62 aa0.97□□□□□ -2.25
RFC1-205ENST00000502991 MT1LQ93083 61 aa0.96□□□□□ -2.26
RFC1-205ENST00000502991 SPRR2FQ96RM1 72 aa0.93□□□□□ -2.26
RFC1-205ENST00000502991 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
RFC1-205ENST00000502991 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
RFC1-205ENST00000502991 MT1MQ8N339 61 aa0.91□□□□□ -2.26
RFC1-205ENST00000502991 KMT2DO14686 5537 aa0.91□□□□□ -2.26
RFC1-205ENST00000502991 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
RFC1-205ENST00000502991 SPRR2EP22531 72 aa0.87□□□□□ -2.27
RFC1-205ENST00000502991 SPRR2BP35325 72 aa0.87□□□□□ -2.27
RFC1-205ENST00000502991 SPRR2AP35326 72 aa0.87□□□□□ -2.27
RFC1-205ENST00000502991 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
RFC1-205ENST00000502991 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
RFC1-205ENST00000502991 SPRR2DP22532 72 aa0.85□□□□□ -2.27
RFC1-205ENST00000502991 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.27
RFC1-205ENST00000502991 MUC12Q9UKN1 5478 aa0.84□□□□□ -2.27
RFC1-205ENST00000502991 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
RFC1-205ENST00000502991 MT1AP04731 61 aa0.82□□□□□ -2.28
RFC1-205ENST00000502991 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
RFC1-205ENST00000502991 MDN1Q9NU22 5596 aa0.78□□□□□ -2.28
RFC1-205ENST00000502991 DSTQ03001 7570 aaKnown RBP0.77□□□□□ -2.29
RFC1-205ENST00000502991 NEBP20929 6669 aa0.76□□□□□ -2.29
RFC1-205ENST00000502991 KRTAP20-1Q3LI63 56 aa0.76□□□□□ -2.29
RFC1-205ENST00000502991 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
RFC1-205ENST00000502991 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
RFC1-205ENST00000502991 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
RFC1-205ENST00000502991 MT4P47944 62 aa0.71□□□□□ -2.3
RFC1-205ENST00000502991 PRM1P04553 51 aa0.7□□□□□ -2.3
RFC1-205ENST00000502991 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
RFC1-205ENST00000502991 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
RFC1-205ENST00000502991 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 36.9 ms