RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
PDE4D-209ENST00000502575 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
PDE4D-209ENST00000502575 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PDE4D-209ENST00000502575 COX7CP15954 63 aa3.38□□□□□ -1.87
PDE4D-209ENST00000502575 ANAPC13Q9BS18 74 aa3.38□□□□□ -1.87
PDE4D-209ENST00000502575 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
PDE4D-209ENST00000502575 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
PDE4D-209ENST00000502575 SEC61GP60059 68 aa3.3□□□□□ -1.88
PDE4D-209ENST00000502575 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
PDE4D-209ENST00000502575 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
PDE4D-209ENST00000502575 COA5Q86WW8 74 aa3.26□□□□□ -1.89
PDE4D-209ENST00000502575 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
PDE4D-209ENST00000502575 MT1EP04732 61 aa3.25□□□□□ -1.89
PDE4D-209ENST00000502575 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
PDE4D-209ENST00000502575 A0A0D9SG42 100 aa3.24□□□□□ -1.89
PDE4D-209ENST00000502575 H7BZZ5 65 aa3.24□□□□□ -1.89
PDE4D-209ENST00000502575 ATP5EP56381 51 aaPredicted RBP3.23□□□□□ -1.89
PDE4D-209ENST00000502575 CCDC179H3BU77 68 aa3.22□□□□□ -1.89
PDE4D-209ENST00000502575 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
PDE4D-209ENST00000502575 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
PDE4D-209ENST00000502575 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
PDE4D-209ENST00000502575 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
PDE4D-209ENST00000502575 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
PDE4D-209ENST00000502575 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
PDE4D-209ENST00000502575 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
PDE4D-209ENST00000502575 A0A1B0GU69 56 aa3.16□□□□□ -1.9
PDE4D-209ENST00000502575 TMEM258P61165 79 aa3.16□□□□□ -1.9
PDE4D-209ENST00000502575 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
PDE4D-209ENST00000502575 A0A1B0GU33 70 aa3.15□□□□□ -1.91
PDE4D-209ENST00000502575 MT1GP13640 62 aa3.11□□□□□ -1.91
PDE4D-209ENST00000502575 MT1MQ8N339 61 aa3.11□□□□□ -1.91
PDE4D-209ENST00000502575 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
PDE4D-209ENST00000502575 MT1LQ93083 61 aa3.09□□□□□ -1.91
PDE4D-209ENST00000502575 SMIM26A0A096LP01 95 aa3.08□□□□□ -1.92
PDE4D-209ENST00000502575 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
PDE4D-209ENST00000502575 MT4P47944 62 aa3.07□□□□□ -1.92
PDE4D-209ENST00000502575 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
PDE4D-209ENST00000502575 V9GYY9 64 aa3.04□□□□□ -1.92
PDE4D-209ENST00000502575 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
PDE4D-209ENST00000502575 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
PDE4D-209ENST00000502575 UQCR11O14957 56 aa3□□□□□ -1.93
PDE4D-209ENST00000502575 TNP1P09430 55 aa2.99□□□□□ -1.93
PDE4D-209ENST00000502575 K7ERS5 55 aa2.97□□□□□ -1.93
PDE4D-209ENST00000502575 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
PDE4D-209ENST00000502575 PSPHP1O15172 72 aa2.95□□□□□ -1.94
PDE4D-209ENST00000502575 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
PDE4D-209ENST00000502575 Q1T7F1 81 aa2.93□□□□□ -1.94
PDE4D-209ENST00000502575 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
PDE4D-209ENST00000502575 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
PDE4D-209ENST00000502575 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
PDE4D-209ENST00000502575 A6NED7 52 aa2.9□□□□□ -1.95
PDE4D-209ENST00000502575 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
PDE4D-209ENST00000502575 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
PDE4D-209ENST00000502575 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
PDE4D-209ENST00000502575 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
PDE4D-209ENST00000502575 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
PDE4D-209ENST00000502575 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
PDE4D-209ENST00000502575 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
PDE4D-209ENST00000502575 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
PDE4D-209ENST00000502575 ROMO1P60602 79 aa2.68□□□□□ -1.98
PDE4D-209ENST00000502575 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
PDE4D-209ENST00000502575 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
PDE4D-209ENST00000502575 MT1AP04731 61 aa2.62□□□□□ -1.99
PDE4D-209ENST00000502575 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PDE4D-209ENST00000502575 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
PDE4D-209ENST00000502575 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
PDE4D-209ENST00000502575 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
PDE4D-209ENST00000502575 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
PDE4D-209ENST00000502575 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
PDE4D-209ENST00000502575 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PDE4D-209ENST00000502575 KTN1-AS1Q86SY8 53 aa2.27□□□□□ -2.05
PDE4D-209ENST00000502575 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
PDE4D-209ENST00000502575 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
PDE4D-209ENST00000502575 INE1O15225 51 aa1.44□□□□□ -2.18
PDE4D-209ENST00000502575 PRM1P04553 51 aa1.36□□□□□ -2.19
PDE4D-209ENST00000502575 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PDE4D-209ENST00000502575 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 136.2 ms