RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 M0QZ58 72 aa2.7□□□□□ -1.98
NFKB1-203ENST00000502367 MT1HP80294 61 aa2.69□□□□□ -1.98
NFKB1-203ENST00000502367 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
NFKB1-203ENST00000502367 ROMO1P60602 79 aa2.63□□□□□ -1.99
NFKB1-203ENST00000502367 SPINT4Q6UDR6 99 aa2.63□□□□□ -1.99
NFKB1-203ENST00000502367 R4GN34 69 aa2.63□□□□□ -1.99
NFKB1-203ENST00000502367 K7ERS5 55 aa2.62□□□□□ -1.99
NFKB1-203ENST00000502367 MT2AP02795 61 aa2.62□□□□□ -1.99
NFKB1-203ENST00000502367 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
NFKB1-203ENST00000502367 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
NFKB1-203ENST00000502367 MT1FP04733 61 aa2.61□□□□□ -1.99
NFKB1-203ENST00000502367 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
NFKB1-203ENST00000502367 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
NFKB1-203ENST00000502367 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
NFKB1-203ENST00000502367 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
NFKB1-203ENST00000502367 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
NFKB1-203ENST00000502367 KRTAP5-8O75690 187 aa2.58□□□□□ -2
NFKB1-203ENST00000502367 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
NFKB1-203ENST00000502367 M0R2T5 61 aa2.53□□□□□ -2
NFKB1-203ENST00000502367 MT1BP07438 61 aa2.52□□□□□ -2.01
NFKB1-203ENST00000502367 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
NFKB1-203ENST00000502367 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
NFKB1-203ENST00000502367 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
NFKB1-203ENST00000502367 MT1XP80297 61 aa2.45□□□□□ -2.02
NFKB1-203ENST00000502367 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
NFKB1-203ENST00000502367 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
NFKB1-203ENST00000502367 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
NFKB1-203ENST00000502367 USH2AO75445 5202 aa2.38□□□□□ -2.03
NFKB1-203ENST00000502367 TNP1P09430 55 aa2.38□□□□□ -2.03
NFKB1-203ENST00000502367 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
NFKB1-203ENST00000502367 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
NFKB1-203ENST00000502367 NEBP20929 6669 aa2.32□□□□□ -2.04
NFKB1-203ENST00000502367 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
NFKB1-203ENST00000502367 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
NFKB1-203ENST00000502367 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
NFKB1-203ENST00000502367 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
NFKB1-203ENST00000502367 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
NFKB1-203ENST00000502367 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
NFKB1-203ENST00000502367 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
NFKB1-203ENST00000502367 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
NFKB1-203ENST00000502367 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
NFKB1-203ENST00000502367 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
NFKB1-203ENST00000502367 MT1EP04732 61 aa2.13□□□□□ -2.07
NFKB1-203ENST00000502367 KMT2DO14686 5537 aa2.12□□□□□ -2.07
NFKB1-203ENST00000502367 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
NFKB1-203ENST00000502367 MT1LQ93083 61 aa2.1□□□□□ -2.07
NFKB1-203ENST00000502367 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
NFKB1-203ENST00000502367 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
NFKB1-203ENST00000502367 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
NFKB1-203ENST00000502367 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
NFKB1-203ENST00000502367 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
NFKB1-203ENST00000502367 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
NFKB1-203ENST00000502367 MT1MQ8N339 61 aa2□□□□□ -2.09
NFKB1-203ENST00000502367 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
NFKB1-203ENST00000502367 MT1GP13640 62 aa1.96□□□□□ -2.1
NFKB1-203ENST00000502367 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
NFKB1-203ENST00000502367 SPRR2EP22531 72 aa1.87□□□□□ -2.11
NFKB1-203ENST00000502367 SPRR2BP35325 72 aa1.87□□□□□ -2.11
NFKB1-203ENST00000502367 SPRR2AP35326 72 aa1.87□□□□□ -2.11
NFKB1-203ENST00000502367 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
NFKB1-203ENST00000502367 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
NFKB1-203ENST00000502367 SPRR2DP22532 72 aa1.81□□□□□ -2.12
NFKB1-203ENST00000502367 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
NFKB1-203ENST00000502367 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
NFKB1-203ENST00000502367 MT1AP04731 61 aa1.77□□□□□ -2.13
NFKB1-203ENST00000502367 INE1O15225 51 aa1.75□□□□□ -2.13
NFKB1-203ENST00000502367 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
NFKB1-203ENST00000502367 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
NFKB1-203ENST00000502367 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
NFKB1-203ENST00000502367 MT4P47944 62 aa1.59□□□□□ -2.15
NFKB1-203ENST00000502367 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
NFKB1-203ENST00000502367 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
NFKB1-203ENST00000502367 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
NFKB1-203ENST00000502367 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
NFKB1-203ENST00000502367 PRM1P04553 51 aa1.4□□□□□ -2.19
NFKB1-203ENST00000502367 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
NFKB1-203ENST00000502367 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
NFKB1-203ENST00000502367 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 62.4 ms