RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
NFKB1-203ENST00000502367 CHIC1Q5VXU3 224 aa27.49■■□□□ 1.99
NFKB1-203ENST00000502367 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
NFKB1-203ENST00000502367 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
NFKB1-203ENST00000502367 FOXD1Q16676 465 aa22.5■■□□□ 1.19
NFKB1-203ENST00000502367 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
NFKB1-203ENST00000502367 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
NFKB1-203ENST00000502367 ADRA2BP18089 450 aa21.52■■□□□ 1.04
NFKB1-203ENST00000502367 PIAS4Q8N2W9 510 aaPredicted RBP21.11■□□□□ 0.97
NFKB1-203ENST00000502367 MSH5O43196 834 aa20.63■□□□□ 0.89
NFKB1-203ENST00000502367 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
NFKB1-203ENST00000502367 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
NFKB1-203ENST00000502367 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
NFKB1-203ENST00000502367 POTEDQ86YR6 584 aa19.38■□□□□ 0.69
NFKB1-203ENST00000502367 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
NFKB1-203ENST00000502367 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
NFKB1-203ENST00000502367 KCNA4P22459 653 aa18.96■□□□□ 0.63
NFKB1-203ENST00000502367 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
NFKB1-203ENST00000502367 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
NFKB1-203ENST00000502367 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
NFKB1-203ENST00000502367 RNF216Q9NWF9 866 aaPredicted RBP18.68■□□□□ 0.58
NFKB1-203ENST00000502367 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
NFKB1-203ENST00000502367 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
NFKB1-203ENST00000502367 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
NFKB1-203ENST00000502367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
NFKB1-203ENST00000502367 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
NFKB1-203ENST00000502367 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
NFKB1-203ENST00000502367 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
NFKB1-203ENST00000502367 ZBTB22O15209 634 aa17.5■□□□□ 0.39
NFKB1-203ENST00000502367 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
NFKB1-203ENST00000502367 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
NFKB1-203ENST00000502367 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
NFKB1-203ENST00000502367 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
NFKB1-203ENST00000502367 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
NFKB1-203ENST00000502367 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
NFKB1-203ENST00000502367 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
NFKB1-203ENST00000502367 CAPN15O75808 1086 aa17.11■□□□□ 0.33
NFKB1-203ENST00000502367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
NFKB1-203ENST00000502367 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
NFKB1-203ENST00000502367 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
NFKB1-203ENST00000502367 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
NFKB1-203ENST00000502367 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
NFKB1-203ENST00000502367 DSG3P32926 999 aa16.86■□□□□ 0.29
NFKB1-203ENST00000502367 APLP2Q06481 763 aa16.86■□□□□ 0.29
NFKB1-203ENST00000502367 ABCB7O75027 752 aa16.85■□□□□ 0.29
NFKB1-203ENST00000502367 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
NFKB1-203ENST00000502367 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
NFKB1-203ENST00000502367 POLA2Q14181 598 aa16.66■□□□□ 0.26
NFKB1-203ENST00000502367 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
NFKB1-203ENST00000502367 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
NFKB1-203ENST00000502367 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
NFKB1-203ENST00000502367 FBLN2P98095 1184 aa16.06■□□□□ 0.16
NFKB1-203ENST00000502367 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
NFKB1-203ENST00000502367 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
NFKB1-203ENST00000502367 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
NFKB1-203ENST00000502367 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
NFKB1-203ENST00000502367 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
NFKB1-203ENST00000502367 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
NFKB1-203ENST00000502367 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-203ENST00000502367 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
NFKB1-203ENST00000502367 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
NFKB1-203ENST00000502367 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
NFKB1-203ENST00000502367 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
NFKB1-203ENST00000502367 FKBP8Q14318 412 aa15.5■□□□□ 0.07
NFKB1-203ENST00000502367 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
NFKB1-203ENST00000502367 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
NFKB1-203ENST00000502367 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
NFKB1-203ENST00000502367 PROM2Q8N271 834 aa15.28■□□□□ 0.04
NFKB1-203ENST00000502367 POTEHQ6S545 545 aa15.26■□□□□ 0.03
NFKB1-203ENST00000502367 PIP4P2Q8N4L2 257 aa15.26■□□□□ 0.03
NFKB1-203ENST00000502367 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
NFKB1-203ENST00000502367 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
NFKB1-203ENST00000502367 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
NFKB1-203ENST00000502367 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
NFKB1-203ENST00000502367 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
NFKB1-203ENST00000502367 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
NFKB1-203ENST00000502367 MIER1Q8N108 512 aa14.88□□□□□ -0.03
NFKB1-203ENST00000502367 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
NFKB1-203ENST00000502367 HAX1O00165 279 aa14.84□□□□□ -0.03
NFKB1-203ENST00000502367 EVX2Q03828 476 aa14.84□□□□□ -0.03
NFKB1-203ENST00000502367 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
NFKB1-203ENST00000502367 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
NFKB1-203ENST00000502367 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
NFKB1-203ENST00000502367 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-203ENST00000502367 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
NFKB1-203ENST00000502367 CD44P16070 742 aaKnown RBP14.64□□□□□ -0.07
NFKB1-203ENST00000502367 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
NFKB1-203ENST00000502367 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
NFKB1-203ENST00000502367 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
NFKB1-203ENST00000502367 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
NFKB1-203ENST00000502367 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
NFKB1-203ENST00000502367 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
NFKB1-203ENST00000502367 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
NFKB1-203ENST00000502367 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
NFKB1-203ENST00000502367 NUBP1P53384 320 aa14.52□□□□□ -0.09
NFKB1-203ENST00000502367 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-203ENST00000502367 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
NFKB1-203ENST00000502367 GABBR2O75899 941 aa14.41□□□□□ -0.1
NFKB1-203ENST00000502367 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
NFKB1-203ENST00000502367 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms