RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 KRTAP9-8Q9BYQ0 159 aa1.48□□□□□ -2.17
NEAT1-202ENST00000501122 MT1LQ93083 61 aa1.46□□□□□ -2.18
NEAT1-202ENST00000501122 LPAP08519 4548 aa1.46□□□□□ -2.18
NEAT1-202ENST00000501122 MT1BP07438 61 aa1.46□□□□□ -2.18
NEAT1-202ENST00000501122 KRTAP9-3Q9BYQ3 159 aa1.45□□□□□ -2.18
NEAT1-202ENST00000501122 KRTAP19-8Q3LI54 63 aa1.44□□□□□ -2.18
NEAT1-202ENST00000501122 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
NEAT1-202ENST00000501122 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
NEAT1-202ENST00000501122 SPRR2DP22532 72 aa1.42□□□□□ -2.18
NEAT1-202ENST00000501122 LCE1AQ5T7P2 110 aa1.42□□□□□ -2.18
NEAT1-202ENST00000501122 SPRR2EP22531 72 aa1.41□□□□□ -2.18
NEAT1-202ENST00000501122 SPRR2BP35325 72 aa1.41□□□□□ -2.18
NEAT1-202ENST00000501122 SPRR2AP35326 72 aa1.41□□□□□ -2.18
NEAT1-202ENST00000501122 LCE2BO14633 110 aa1.41□□□□□ -2.18
NEAT1-202ENST00000501122 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.18
NEAT1-202ENST00000501122 LCE2AQ5TA79 106 aaPredicted RBP1.4□□□□□ -2.19
NEAT1-202ENST00000501122 KMT2DO14686 5537 aa1.39□□□□□ -2.19
NEAT1-202ENST00000501122 KRTAP2-2Q9BYT5 123 aa1.39□□□□□ -2.19
NEAT1-202ENST00000501122 MT1EP04732 61 aa1.38□□□□□ -2.19
NEAT1-202ENST00000501122 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
NEAT1-202ENST00000501122 LCE1EQ5T753 118 aa1.37□□□□□ -2.19
NEAT1-202ENST00000501122 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
NEAT1-202ENST00000501122 MT1AP04731 61 aa1.36□□□□□ -2.19
NEAT1-202ENST00000501122 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
NEAT1-202ENST00000501122 LCE4AQ5TA78 99 aa1.35□□□□□ -2.19
NEAT1-202ENST00000501122 MUC2Q02817 5179 aa1.35□□□□□ -2.19
NEAT1-202ENST00000501122 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
NEAT1-202ENST00000501122 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
NEAT1-202ENST00000501122 LCE2DQ5TA82 110 aaPredicted RBP1.34□□□□□ -2.19
NEAT1-202ENST00000501122 KRTAP9-7A8MTY7 169 aa1.34□□□□□ -2.2
NEAT1-202ENST00000501122 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.2
NEAT1-202ENST00000501122 RNF213Q63HN8 5207 aa1.32□□□□□ -2.2
NEAT1-202ENST00000501122 KRTAP9-6A0A140TA67 174 aa1.32□□□□□ -2.2
NEAT1-202ENST00000501122 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
NEAT1-202ENST00000501122 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
NEAT1-202ENST00000501122 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
NEAT1-202ENST00000501122 LCE1FQ5T754 118 aa1.29□□□□□ -2.2
NEAT1-202ENST00000501122 USH2AO75445 5202 aa1.29□□□□□ -2.2
NEAT1-202ENST00000501122 LCE1DQ5T752 114 aa1.29□□□□□ -2.2
NEAT1-202ENST00000501122 KRTAP9-2Q9BYQ4 174 aa1.28□□□□□ -2.2
NEAT1-202ENST00000501122 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.21
NEAT1-202ENST00000501122 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
NEAT1-202ENST00000501122 MT4P47944 62 aa1.26□□□□□ -2.21
NEAT1-202ENST00000501122 LCE5AQ5TCM9 118 aa1.26□□□□□ -2.21
NEAT1-202ENST00000501122 MT1MQ8N339 61 aa1.24□□□□□ -2.21
NEAT1-202ENST00000501122 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
NEAT1-202ENST00000501122 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
NEAT1-202ENST00000501122 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
NEAT1-202ENST00000501122 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
NEAT1-202ENST00000501122 KRTAP4-11Q9BYQ6 195 aa1.2□□□□□ -2.22
NEAT1-202ENST00000501122 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
NEAT1-202ENST00000501122 LCE1CQ5T751 118 aa1.17□□□□□ -2.22
NEAT1-202ENST00000501122 KRTAP9-4Q9BYQ2 154 aa1.16□□□□□ -2.22
NEAT1-202ENST00000501122 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
NEAT1-202ENST00000501122 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
NEAT1-202ENST00000501122 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
NEAT1-202ENST00000501122 KRTAP9-9Q9BYP9 154 aa1.1□□□□□ -2.23
NEAT1-202ENST00000501122 SSPOA2VEC9 5147 aa1.09□□□□□ -2.23
NEAT1-202ENST00000501122 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.24
NEAT1-202ENST00000501122 KRTAP4-6Q9BYQ5 205 aa1.06□□□□□ -2.24
NEAT1-202ENST00000501122 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
NEAT1-202ENST00000501122 KRTAP4-12Q9BQ66 201 aa1.04□□□□□ -2.24
NEAT1-202ENST00000501122 KRTAP4-2Q9BYR5 136 aa1.04□□□□□ -2.24
NEAT1-202ENST00000501122 KRTAP9-1A8MXZ3 250 aaPredicted RBP1□□□□□ -2.25
NEAT1-202ENST00000501122 KRTAP5-9P26371 169 aa0.92□□□□□ -2.26
NEAT1-202ENST00000501122 KRTAP5-2Q701N4 177 aa0.88□□□□□ -2.27
NEAT1-202ENST00000501122 KRTAP5-4Q6L8H1 288 aa0.8□□□□□ -2.28
NEAT1-202ENST00000501122 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
NEAT1-202ENST00000501122 KRTAP5-3Q6L8H2 238 aa0.74□□□□□ -2.29
NEAT1-202ENST00000501122 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.74□□□□□ -2.29
NEAT1-202ENST00000501122 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
NEAT1-202ENST00000501122 KRTAP5-8O75690 187 aa0.71□□□□□ -2.3
NEAT1-202ENST00000501122 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
NEAT1-202ENST00000501122 KRTAP5-1Q6L8H4 278 aa0.67□□□□□ -2.3
NEAT1-202ENST00000501122 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
NEAT1-202ENST00000501122 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
NEAT1-202ENST00000501122 KRTAP5-11Q6L8G4 156 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms