RNA–Protein interactions for RNA: ENST00000500112.2

CASC19-201, Transcript of cancer susceptibility 19, humanhuman

TSL 1 (best) BASIC

Gene CASC19, Length 5,735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-201ENST00000500112 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
CASC19-201ENST00000500112 LPAP08519 4548 aa1.99□□□□□ -2.09
CASC19-201ENST00000500112 SPRR2DP22532 72 aa1.97□□□□□ -2.09
CASC19-201ENST00000500112 MT1EP04732 61 aa1.94□□□□□ -2.1
CASC19-201ENST00000500112 LCE3CQ5T5A8 94 aa1.94□□□□□ -2.1
CASC19-201ENST00000500112 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.92□□□□□ -2.1
CASC19-201ENST00000500112 MT1GP13640 62 aa1.91□□□□□ -2.1
CASC19-201ENST00000500112 FAT4Q6V0I7 4981 aa1.91□□□□□ -2.1
CASC19-201ENST00000500112 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
CASC19-201ENST00000500112 MT1LQ93083 61 aa1.89□□□□□ -2.11
CASC19-201ENST00000500112 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
CASC19-201ENST00000500112 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
CASC19-201ENST00000500112 KRTAP4-8A0A0G2JLE6 195 aa1.86□□□□□ -2.11
CASC19-201ENST00000500112 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
CASC19-201ENST00000500112 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
CASC19-201ENST00000500112 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
CASC19-201ENST00000500112 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
CASC19-201ENST00000500112 MUC2Q02817 5179 aa1.82□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP4-9Q9BYQ8 210 aa1.8□□□□□ -2.12
CASC19-201ENST00000500112 MT1MQ8N339 61 aa1.8□□□□□ -2.12
CASC19-201ENST00000500112 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP4-11Q9BYQ6 195 aa1.79□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP4-7Q9BYR0 210 aa1.78□□□□□ -2.12
CASC19-201ENST00000500112 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
CASC19-201ENST00000500112 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
CASC19-201ENST00000500112 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
CASC19-201ENST00000500112 MT4P47944 62 aa1.75□□□□□ -2.13
CASC19-201ENST00000500112 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
CASC19-201ENST00000500112 KRTAP2-2Q9BYT5 123 aa1.73□□□□□ -2.13
CASC19-201ENST00000500112 MT1AP04731 61 aa1.71□□□□□ -2.14
CASC19-201ENST00000500112 USH2AO75445 5202 aa1.71□□□□□ -2.14
CASC19-201ENST00000500112 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
CASC19-201ENST00000500112 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
CASC19-201ENST00000500112 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
CASC19-201ENST00000500112 KMT2DO14686 5537 aa1.65□□□□□ -2.15
CASC19-201ENST00000500112 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
CASC19-201ENST00000500112 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
CASC19-201ENST00000500112 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
CASC19-201ENST00000500112 NEBP20929 6669 aa1.62□□□□□ -2.15
CASC19-201ENST00000500112 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
CASC19-201ENST00000500112 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
CASC19-201ENST00000500112 KRTAP4-2Q9BYR5 136 aa1.59□□□□□ -2.15
CASC19-201ENST00000500112 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
CASC19-201ENST00000500112 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CASC19-201ENST00000500112 KRTAP9-6A8MVA2 160 aa1.57□□□□□ -2.16
CASC19-201ENST00000500112 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
CASC19-201ENST00000500112 KRTAP5-4Q6L8H1 288 aa1.55□□□□□ -2.16
CASC19-201ENST00000500112 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
CASC19-201ENST00000500112 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.17
CASC19-201ENST00000500112 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
CASC19-201ENST00000500112 LCE1EQ5T753 118 aa1.48□□□□□ -2.17
CASC19-201ENST00000500112 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
CASC19-201ENST00000500112 KRTAP5-3Q6L8H2 238 aa1.45□□□□□ -2.18
CASC19-201ENST00000500112 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
CASC19-201ENST00000500112 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
CASC19-201ENST00000500112 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
CASC19-201ENST00000500112 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
CASC19-201ENST00000500112 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
CASC19-201ENST00000500112 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.21
CASC19-201ENST00000500112 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
CASC19-201ENST00000500112 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
CASC19-201ENST00000500112 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
CASC19-201ENST00000500112 PRM1P04553 51 aa1.24□□□□□ -2.21
CASC19-201ENST00000500112 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
CASC19-201ENST00000500112 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
CASC19-201ENST00000500112 KRTAP5-1Q6L8H4 278 aa1.15□□□□□ -2.23
CASC19-201ENST00000500112 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
CASC19-201ENST00000500112 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
CASC19-201ENST00000500112 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
CASC19-201ENST00000500112 KRTAP4-4Q9BYR3 166 aa1.05□□□□□ -2.24
CASC19-201ENST00000500112 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
CASC19-201ENST00000500112 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
CASC19-201ENST00000500112 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CASC19-201ENST00000500112 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 74.8 ms