RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
PBX1-211ENST00000498497 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
PBX1-211ENST00000498497 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
PBX1-211ENST00000498497 LCE2BO14633 110 aa3.81□□□□□ -1.8
PBX1-211ENST00000498497 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
PBX1-211ENST00000498497 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PBX1-211ENST00000498497 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PBX1-211ENST00000498497 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
PBX1-211ENST00000498497 MT1GP13640 62 aa3.75□□□□□ -1.81
PBX1-211ENST00000498497 PRM1P04553 51 aa3.73□□□□□ -1.81
PBX1-211ENST00000498497 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
PBX1-211ENST00000498497 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
PBX1-211ENST00000498497 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
PBX1-211ENST00000498497 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
PBX1-211ENST00000498497 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PBX1-211ENST00000498497 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
PBX1-211ENST00000498497 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
PBX1-211ENST00000498497 MT1LQ93083 61 aa3.61□□□□□ -1.83
PBX1-211ENST00000498497 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
PBX1-211ENST00000498497 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
PBX1-211ENST00000498497 MT1EP04732 61 aa3.49□□□□□ -1.85
PBX1-211ENST00000498497 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
PBX1-211ENST00000498497 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
PBX1-211ENST00000498497 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
PBX1-211ENST00000498497 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
PBX1-211ENST00000498497 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
PBX1-211ENST00000498497 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
PBX1-211ENST00000498497 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
PBX1-211ENST00000498497 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
PBX1-211ENST00000498497 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
PBX1-211ENST00000498497 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
PBX1-211ENST00000498497 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PBX1-211ENST00000498497 MT1MQ8N339 61 aa3.25□□□□□ -1.89
PBX1-211ENST00000498497 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
PBX1-211ENST00000498497 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PBX1-211ENST00000498497 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PBX1-211ENST00000498497 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PBX1-211ENST00000498497 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
PBX1-211ENST00000498497 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
PBX1-211ENST00000498497 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PBX1-211ENST00000498497 MT1AP04731 61 aa3.08□□□□□ -1.92
PBX1-211ENST00000498497 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PBX1-211ENST00000498497 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
PBX1-211ENST00000498497 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
PBX1-211ENST00000498497 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
PBX1-211ENST00000498497 NEBP20929 6669 aa3.02□□□□□ -1.93
PBX1-211ENST00000498497 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
PBX1-211ENST00000498497 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
PBX1-211ENST00000498497 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
PBX1-211ENST00000498497 MT4P47944 62 aa2.78□□□□□ -1.96
PBX1-211ENST00000498497 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
PBX1-211ENST00000498497 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
PBX1-211ENST00000498497 MT3P25713 68 aa2.62□□□□□ -1.99
PBX1-211ENST00000498497 MUC5ACP98088 5654 aa2.58□□□□□ -2
PBX1-211ENST00000498497 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
PBX1-211ENST00000498497 LCE4AQ5TA78 99 aa2.56□□□□□ -2
PBX1-211ENST00000498497 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
PBX1-211ENST00000498497 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PBX1-211ENST00000498497 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
PBX1-211ENST00000498497 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
PBX1-211ENST00000498497 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
PBX1-211ENST00000498497 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.02
PBX1-211ENST00000498497 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
PBX1-211ENST00000498497 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PBX1-211ENST00000498497 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
PBX1-211ENST00000498497 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
PBX1-211ENST00000498497 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
PBX1-211ENST00000498497 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
PBX1-211ENST00000498497 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
PBX1-211ENST00000498497 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
PBX1-211ENST00000498497 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
PBX1-211ENST00000498497 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
PBX1-211ENST00000498497 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
PBX1-211ENST00000498497 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
PBX1-211ENST00000498497 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
PBX1-211ENST00000498497 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
PBX1-211ENST00000498497 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PBX1-211ENST00000498497 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 19.1 ms