RNA–Protein interactions for RNA: ENST00000498402.2

LRRC41-205, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 2,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-205ENST00000498402 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
LRRC41-205ENST00000498402 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
LRRC41-205ENST00000498402 INE1O15225 51 aa5.84□□□□□ -1.47
LRRC41-205ENST00000498402 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
LRRC41-205ENST00000498402 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
LRRC41-205ENST00000498402 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
LRRC41-205ENST00000498402 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
LRRC41-205ENST00000498402 MT1GP13640 62 aa5.81□□□□□ -1.48
LRRC41-205ENST00000498402 MT1MQ8N339 61 aa5.81□□□□□ -1.48
LRRC41-205ENST00000498402 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
LRRC41-205ENST00000498402 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
LRRC41-205ENST00000498402 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
LRRC41-205ENST00000498402 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
LRRC41-205ENST00000498402 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.49
LRRC41-205ENST00000498402 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
LRRC41-205ENST00000498402 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
LRRC41-205ENST00000498402 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
LRRC41-205ENST00000498402 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
LRRC41-205ENST00000498402 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
LRRC41-205ENST00000498402 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
LRRC41-205ENST00000498402 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
LRRC41-205ENST00000498402 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
LRRC41-205ENST00000498402 SPRR2EP22531 72 aa5.29□□□□□ -1.56
LRRC41-205ENST00000498402 SPRR2BP35325 72 aa5.29□□□□□ -1.56
LRRC41-205ENST00000498402 SPRR2AP35326 72 aa5.29□□□□□ -1.56
LRRC41-205ENST00000498402 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
LRRC41-205ENST00000498402 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
LRRC41-205ENST00000498402 MT1AP04731 61 aa5.2□□□□□ -1.58
LRRC41-205ENST00000498402 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
LRRC41-205ENST00000498402 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
LRRC41-205ENST00000498402 NEBP20929 6669 aa5.09□□□□□ -1.59
LRRC41-205ENST00000498402 SPRR2DP22532 72 aa5.08□□□□□ -1.6
LRRC41-205ENST00000498402 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
LRRC41-205ENST00000498402 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
LRRC41-205ENST00000498402 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
LRRC41-205ENST00000498402 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.62
LRRC41-205ENST00000498402 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
LRRC41-205ENST00000498402 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
LRRC41-205ENST00000498402 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
LRRC41-205ENST00000498402 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
LRRC41-205ENST00000498402 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
LRRC41-205ENST00000498402 MT3P25713 68 aa4.68□□□□□ -1.66
LRRC41-205ENST00000498402 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
LRRC41-205ENST00000498402 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
LRRC41-205ENST00000498402 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
LRRC41-205ENST00000498402 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
LRRC41-205ENST00000498402 PRM1P04553 51 aa4.43□□□□□ -1.7
LRRC41-205ENST00000498402 MT4P47944 62 aa4.43□□□□□ -1.7
LRRC41-205ENST00000498402 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
LRRC41-205ENST00000498402 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
LRRC41-205ENST00000498402 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
LRRC41-205ENST00000498402 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
LRRC41-205ENST00000498402 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
LRRC41-205ENST00000498402 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
LRRC41-205ENST00000498402 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
LRRC41-205ENST00000498402 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
LRRC41-205ENST00000498402 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
LRRC41-205ENST00000498402 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
LRRC41-205ENST00000498402 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
LRRC41-205ENST00000498402 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LRRC41-205ENST00000498402 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
LRRC41-205ENST00000498402 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
LRRC41-205ENST00000498402 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
LRRC41-205ENST00000498402 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
LRRC41-205ENST00000498402 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
LRRC41-205ENST00000498402 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
LRRC41-205ENST00000498402 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
LRRC41-205ENST00000498402 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
LRRC41-205ENST00000498402 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
LRRC41-205ENST00000498402 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
LRRC41-205ENST00000498402 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
LRRC41-205ENST00000498402 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
LRRC41-205ENST00000498402 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LRRC41-205ENST00000498402 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
LRRC41-205ENST00000498402 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
LRRC41-205ENST00000498402 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
LRRC41-205ENST00000498402 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
LRRC41-205ENST00000498402 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms