RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
ITGB5-210ENST00000496703 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
ITGB5-210ENST00000496703 PSPHP1O15172 72 aa5.66□□□□□ -1.5
ITGB5-210ENST00000496703 Q1T7F1 81 aa5.64□□□□□ -1.51
ITGB5-210ENST00000496703 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
ITGB5-210ENST00000496703 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
ITGB5-210ENST00000496703 V9GYY9 64 aa5.6□□□□□ -1.51
ITGB5-210ENST00000496703 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
ITGB5-210ENST00000496703 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
ITGB5-210ENST00000496703 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
ITGB5-210ENST00000496703 K7ERS5 55 aa5.49□□□□□ -1.53
ITGB5-210ENST00000496703 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
ITGB5-210ENST00000496703 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
ITGB5-210ENST00000496703 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
ITGB5-210ENST00000496703 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
ITGB5-210ENST00000496703 A6NED7 52 aa5.43□□□□□ -1.54
ITGB5-210ENST00000496703 MT4P47944 62 aa5.42□□□□□ -1.54
ITGB5-210ENST00000496703 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
ITGB5-210ENST00000496703 PCP4P48539 62 aa5.38□□□□□ -1.55
ITGB5-210ENST00000496703 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
ITGB5-210ENST00000496703 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
ITGB5-210ENST00000496703 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
ITGB5-210ENST00000496703 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
ITGB5-210ENST00000496703 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
ITGB5-210ENST00000496703 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
ITGB5-210ENST00000496703 ROMO1P60602 79 aa5.21□□□□□ -1.58
ITGB5-210ENST00000496703 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
ITGB5-210ENST00000496703 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
ITGB5-210ENST00000496703 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
ITGB5-210ENST00000496703 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
ITGB5-210ENST00000496703 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
ITGB5-210ENST00000496703 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
ITGB5-210ENST00000496703 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
ITGB5-210ENST00000496703 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
ITGB5-210ENST00000496703 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
ITGB5-210ENST00000496703 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
ITGB5-210ENST00000496703 MT1AP04731 61 aa4.89□□□□□ -1.63
ITGB5-210ENST00000496703 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
ITGB5-210ENST00000496703 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
ITGB5-210ENST00000496703 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
ITGB5-210ENST00000496703 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
ITGB5-210ENST00000496703 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
ITGB5-210ENST00000496703 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
ITGB5-210ENST00000496703 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
ITGB5-210ENST00000496703 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
ITGB5-210ENST00000496703 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
ITGB5-210ENST00000496703 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
ITGB5-210ENST00000496703 MT3P25713 68 aa4.43□□□□□ -1.7
ITGB5-210ENST00000496703 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
ITGB5-210ENST00000496703 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
ITGB5-210ENST00000496703 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
ITGB5-210ENST00000496703 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
ITGB5-210ENST00000496703 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
ITGB5-210ENST00000496703 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
ITGB5-210ENST00000496703 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
ITGB5-210ENST00000496703 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
ITGB5-210ENST00000496703 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
ITGB5-210ENST00000496703 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
ITGB5-210ENST00000496703 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
ITGB5-210ENST00000496703 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
ITGB5-210ENST00000496703 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
ITGB5-210ENST00000496703 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
ITGB5-210ENST00000496703 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
ITGB5-210ENST00000496703 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
ITGB5-210ENST00000496703 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
ITGB5-210ENST00000496703 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
ITGB5-210ENST00000496703 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
ITGB5-210ENST00000496703 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
ITGB5-210ENST00000496703 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
ITGB5-210ENST00000496703 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
ITGB5-210ENST00000496703 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
ITGB5-210ENST00000496703 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ITGB5-210ENST00000496703 PRM1P04553 51 aa2.7□□□□□ -1.98
ITGB5-210ENST00000496703 H3BS24 57 aa2.61□□□□□ -1.99
ITGB5-210ENST00000496703 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
ITGB5-210ENST00000496703 INE1O15225 51 aa2.27□□□□□ -2.05
ITGB5-210ENST00000496703 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
ITGB5-210ENST00000496703 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 100.3 ms