RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
UBXN11-216ENST00000496466 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
UBXN11-216ENST00000496466 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
UBXN11-216ENST00000496466 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
UBXN11-216ENST00000496466 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
UBXN11-216ENST00000496466 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
UBXN11-216ENST00000496466 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
UBXN11-216ENST00000496466 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
UBXN11-216ENST00000496466 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
UBXN11-216ENST00000496466 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
UBXN11-216ENST00000496466 MT1MQ8N339 61 aa4.9□□□□□ -1.62
UBXN11-216ENST00000496466 MT1GP13640 62 aa4.89□□□□□ -1.63
UBXN11-216ENST00000496466 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
UBXN11-216ENST00000496466 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
UBXN11-216ENST00000496466 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
UBXN11-216ENST00000496466 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
UBXN11-216ENST00000496466 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
UBXN11-216ENST00000496466 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
UBXN11-216ENST00000496466 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
UBXN11-216ENST00000496466 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
UBXN11-216ENST00000496466 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
UBXN11-216ENST00000496466 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
UBXN11-216ENST00000496466 SPRR2EP22531 72 aa4.52□□□□□ -1.69
UBXN11-216ENST00000496466 SPRR2BP35325 72 aa4.52□□□□□ -1.69
UBXN11-216ENST00000496466 SPRR2AP35326 72 aa4.52□□□□□ -1.69
UBXN11-216ENST00000496466 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
UBXN11-216ENST00000496466 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
UBXN11-216ENST00000496466 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
UBXN11-216ENST00000496466 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.7
UBXN11-216ENST00000496466 MT1AP04731 61 aa4.37□□□□□ -1.71
UBXN11-216ENST00000496466 NEBP20929 6669 aa4.36□□□□□ -1.71
UBXN11-216ENST00000496466 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
UBXN11-216ENST00000496466 SPRR2DP22532 72 aa4.34□□□□□ -1.71
UBXN11-216ENST00000496466 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.72
UBXN11-216ENST00000496466 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
UBXN11-216ENST00000496466 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
UBXN11-216ENST00000496466 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
UBXN11-216ENST00000496466 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
UBXN11-216ENST00000496466 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
UBXN11-216ENST00000496466 PRM1P04553 51 aa3.97□□□□□ -1.77
UBXN11-216ENST00000496466 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
UBXN11-216ENST00000496466 MT3P25713 68 aa3.93□□□□□ -1.78
UBXN11-216ENST00000496466 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
UBXN11-216ENST00000496466 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.78
UBXN11-216ENST00000496466 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
UBXN11-216ENST00000496466 MT4P47944 62 aa3.82□□□□□ -1.8
UBXN11-216ENST00000496466 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
UBXN11-216ENST00000496466 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
UBXN11-216ENST00000496466 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
UBXN11-216ENST00000496466 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
UBXN11-216ENST00000496466 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
UBXN11-216ENST00000496466 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
UBXN11-216ENST00000496466 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
UBXN11-216ENST00000496466 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
UBXN11-216ENST00000496466 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
UBXN11-216ENST00000496466 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
UBXN11-216ENST00000496466 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.89
UBXN11-216ENST00000496466 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
UBXN11-216ENST00000496466 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
UBXN11-216ENST00000496466 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
UBXN11-216ENST00000496466 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
UBXN11-216ENST00000496466 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
UBXN11-216ENST00000496466 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
UBXN11-216ENST00000496466 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
UBXN11-216ENST00000496466 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
UBXN11-216ENST00000496466 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
UBXN11-216ENST00000496466 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
UBXN11-216ENST00000496466 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
UBXN11-216ENST00000496466 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
UBXN11-216ENST00000496466 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
UBXN11-216ENST00000496466 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
UBXN11-216ENST00000496466 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
UBXN11-216ENST00000496466 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
UBXN11-216ENST00000496466 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
UBXN11-216ENST00000496466 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
UBXN11-216ENST00000496466 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
UBXN11-216ENST00000496466 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
UBXN11-216ENST00000496466 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 101 ms